Protein–RNA interactions for Protein: P0CG01

GKN3P, Gastrokine-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GKN3PP0CG01 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
GKN3PP0CG01 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GKN3PP0CG01 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
GKN3PP0CG01 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
GKN3PP0CG01 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
GKN3PP0CG01 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GKN3PP0CG01 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
GKN3PP0CG01 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GKN3PP0CG01 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.07■□□□□ 0.16
GKN3PP0CG01 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
GKN3PP0CG01 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.07■□□□□ 0.16
GKN3PP0CG01 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.07■□□□□ 0.16
GKN3PP0CG01 TSSC2-201ENST00000450217 709 ntBASIC16.07■□□□□ 0.16
GKN3PP0CG01 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.07■□□□□ 0.16
GKN3PP0CG01 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC16.07■□□□□ 0.16
GKN3PP0CG01 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.07■□□□□ 0.16
GKN3PP0CG01 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.07■□□□□ 0.16
GKN3PP0CG01 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.07■□□□□ 0.16
GKN3PP0CG01 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.07■□□□□ 0.16
GKN3PP0CG01 AP005901.3-202ENST00000581653 237 ntBASIC16.07■□□□□ 0.16
GKN3PP0CG01 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.07■□□□□ 0.16
GKN3PP0CG01 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GKN3PP0CG01 KRT18P1-202ENST00000452408 1331 ntBASIC16.07■□□□□ 0.16
GKN3PP0CG01 AC016396.2-201ENST00000562575 1417 ntBASIC16.07■□□□□ 0.16
GKN3PP0CG01 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
GKN3PP0CG01 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
GKN3PP0CG01 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GKN3PP0CG01 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.07■□□□□ 0.16
GKN3PP0CG01 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GKN3PP0CG01 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
GKN3PP0CG01 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.07■□□□□ 0.16
GKN3PP0CG01 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
GKN3PP0CG01 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GKN3PP0CG01 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GKN3PP0CG01 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.06■□□□□ 0.16
GKN3PP0CG01 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GKN3PP0CG01 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
GKN3PP0CG01 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GKN3PP0CG01 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
GKN3PP0CG01 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.06■□□□□ 0.16
GKN3PP0CG01 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
GKN3PP0CG01 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
GKN3PP0CG01 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
GKN3PP0CG01 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.06■□□□□ 0.16
GKN3PP0CG01 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GKN3PP0CG01 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
GKN3PP0CG01 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
GKN3PP0CG01 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.06■□□□□ 0.16
GKN3PP0CG01 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
GKN3PP0CG01 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GKN3PP0CG01 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GKN3PP0CG01 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.06■□□□□ 0.16
GKN3PP0CG01 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.06■□□□□ 0.16
GKN3PP0CG01 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.06■□□□□ 0.16
GKN3PP0CG01 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
GKN3PP0CG01 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
GKN3PP0CG01 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
GKN3PP0CG01 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.06■□□□□ 0.16
GKN3PP0CG01 IER3-202ENST00000376377 1350 ntBASIC16.06■□□□□ 0.16
GKN3PP0CG01 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
GKN3PP0CG01 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
GKN3PP0CG01 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GKN3PP0CG01 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
GKN3PP0CG01 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.06■□□□□ 0.16
GKN3PP0CG01 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
GKN3PP0CG01 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.06■□□□□ 0.16
GKN3PP0CG01 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
GKN3PP0CG01 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.06■□□□□ 0.16
GKN3PP0CG01 IGHV3-52-201ENST00000519770 353 ntBASIC16.06■□□□□ 0.16
GKN3PP0CG01 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC16.06■□□□□ 0.16
GKN3PP0CG01 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
GKN3PP0CG01 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
GKN3PP0CG01 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.06■□□□□ 0.16
GKN3PP0CG01 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
GKN3PP0CG01 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GKN3PP0CG01 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
GKN3PP0CG01 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
GKN3PP0CG01 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
GKN3PP0CG01 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GKN3PP0CG01 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GKN3PP0CG01 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GKN3PP0CG01 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GKN3PP0CG01 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GKN3PP0CG01 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
GKN3PP0CG01 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
GKN3PP0CG01 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
GKN3PP0CG01 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
GKN3PP0CG01 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GKN3PP0CG01 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
GKN3PP0CG01 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GKN3PP0CG01 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.05■□□□□ 0.16
GKN3PP0CG01 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
GKN3PP0CG01 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.05■□□□□ 0.16
GKN3PP0CG01 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GKN3PP0CG01 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.05■□□□□ 0.16
GKN3PP0CG01 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
GKN3PP0CG01 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GKN3PP0CG01 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
GKN3PP0CG01 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
GKN3PP0CG01 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms