Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC19.56■□□□□ 0.72
TPM3P06753 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC19.56■□□□□ 0.72
TPM3P06753 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC19.56■□□□□ 0.72
TPM3P06753 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TPM3P06753 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TPM3P06753 C2orf69P3-201ENST00000565542 1120 ntBASIC19.56■□□□□ 0.72
TPM3P06753 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TPM3P06753 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
TPM3P06753 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
TPM3P06753 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
TPM3P06753 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TPM3P06753 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TPM3P06753 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.56■□□□□ 0.72
TPM3P06753 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC19.56■□□□□ 0.72
TPM3P06753 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
TPM3P06753 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
TPM3P06753 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TPM3P06753 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TPM3P06753 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TPM3P06753 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC19.56■□□□□ 0.72
TPM3P06753 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TPM3P06753 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TPM3P06753 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TPM3P06753 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC19.56■□□□□ 0.72
TPM3P06753 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC19.56■□□□□ 0.72
TPM3P06753 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
TPM3P06753 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TPM3P06753 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TPM3P06753 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC19.56■□□□□ 0.72
TPM3P06753 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
TPM3P06753 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TPM3P06753 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TPM3P06753 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC19.55■□□□□ 0.72
TPM3P06753 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC19.55■□□□□ 0.72
TPM3P06753 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TPM3P06753 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TPM3P06753 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
TPM3P06753 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.55■□□□□ 0.72
TPM3P06753 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
TPM3P06753 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.55■□□□□ 0.72
TPM3P06753 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
TPM3P06753 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TPM3P06753 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TPM3P06753 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TPM3P06753 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TPM3P06753 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC19.55■□□□□ 0.72
TPM3P06753 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC19.55■□□□□ 0.72
TPM3P06753 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
TPM3P06753 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TPM3P06753 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.55■□□□□ 0.72
TPM3P06753 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
TPM3P06753 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TPM3P06753 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC19.55■□□□□ 0.72
TPM3P06753 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
TPM3P06753 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TPM3P06753 AC113404.2-201ENST00000507884 177 ntBASIC19.55■□□□□ 0.72
TPM3P06753 AP003071.4-201ENST00000562276 1284 ntBASIC19.55■□□□□ 0.72
TPM3P06753 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
TPM3P06753 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC19.55■□□□□ 0.72
TPM3P06753 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
TPM3P06753 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC19.55■□□□□ 0.72
TPM3P06753 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TPM3P06753 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
TPM3P06753 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TPM3P06753 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TPM3P06753 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
TPM3P06753 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
TPM3P06753 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TPM3P06753 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
TPM3P06753 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
TPM3P06753 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC19.55■□□□□ 0.72
TPM3P06753 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC19.55■□□□□ 0.72
TPM3P06753 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
TPM3P06753 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TPM3P06753 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TPM3P06753 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.54■□□□□ 0.72
TPM3P06753 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TPM3P06753 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TPM3P06753 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
TPM3P06753 AC092068.3-201ENST00000587894 2016 ntBASIC19.54■□□□□ 0.72
TPM3P06753 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
TPM3P06753 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC19.54■□□□□ 0.72
TPM3P06753 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TPM3P06753 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TPM3P06753 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TPM3P06753 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
TPM3P06753 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TPM3P06753 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TPM3P06753 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.54■□□□□ 0.72
TPM3P06753 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TPM3P06753 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC19.54■□□□□ 0.72
TPM3P06753 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.54■□□□□ 0.72
TPM3P06753 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC19.54■□□□□ 0.72
TPM3P06753 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TPM3P06753 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TPM3P06753 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC19.54■□□□□ 0.72
TPM3P06753 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
TPM3P06753 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TPM3P06753 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC19.54■□□□□ 0.72
TPM3P06753 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms