Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
HMGCRP04035 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC19.55■□□□□ 0.72
HMGCRP04035 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC19.55■□□□□ 0.72
HMGCRP04035 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HMGCRP04035 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HMGCRP04035 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HMGCRP04035 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.55■□□□□ 0.72
HMGCRP04035 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.55■□□□□ 0.72
HMGCRP04035 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC19.55■□□□□ 0.72
HMGCRP04035 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HMGCRP04035 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HMGCRP04035 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.54■□□□□ 0.72
HMGCRP04035 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HMGCRP04035 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HMGCRP04035 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HMGCRP04035 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.54■□□□□ 0.72
HMGCRP04035 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.54■□□□□ 0.72
HMGCRP04035 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
HMGCRP04035 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HMGCRP04035 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC19.54■□□□□ 0.72
HMGCRP04035 MIR943-201ENST00000401286 94 ntBASIC19.54■□□□□ 0.72
HMGCRP04035 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC19.54■□□□□ 0.72
HMGCRP04035 KRT18P32-201ENST00000424695 1287 ntBASIC19.54■□□□□ 0.72
HMGCRP04035 AL592309.1-201ENST00000443127 649 ntBASIC19.54■□□□□ 0.72
HMGCRP04035 TSPY16P-201ENST00000449843 468 ntBASIC19.54■□□□□ 0.72
HMGCRP04035 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
HMGCRP04035 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC19.54■□□□□ 0.72
HMGCRP04035 RN7SL589P-201ENST00000481268 310 ntBASIC19.54■□□□□ 0.72
HMGCRP04035 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC19.54■□□□□ 0.72
HMGCRP04035 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC19.54■□□□□ 0.72
HMGCRP04035 RN7SL204P-201ENST00000582831 262 ntBASIC19.54■□□□□ 0.72
HMGCRP04035 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
HMGCRP04035 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.54■□□□□ 0.72
HMGCRP04035 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.54■□□□□ 0.72
HMGCRP04035 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC19.54■□□□□ 0.72
HMGCRP04035 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HMGCRP04035 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
HMGCRP04035 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
HMGCRP04035 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HMGCRP04035 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HMGCRP04035 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
HMGCRP04035 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
HMGCRP04035 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC19.53■□□□□ 0.72
HMGCRP04035 AC009949.1-201ENST00000623048 1830 ntBASIC19.53■□□□□ 0.72
HMGCRP04035 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC19.53■□□□□ 0.72
HMGCRP04035 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HMGCRP04035 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.53■□□□□ 0.72
HMGCRP04035 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
HMGCRP04035 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HMGCRP04035 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC19.53■□□□□ 0.72
HMGCRP04035 VMA21-202ENST00000370361 693 ntTSL 5 BASIC19.53■□□□□ 0.72
HMGCRP04035 KLF2P3-201ENST00000451977 1087 ntBASIC19.53■□□□□ 0.72
HMGCRP04035 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC19.53■□□□□ 0.72
HMGCRP04035 CCDC74BP1-201ENST00000508880 1123 ntBASIC19.53■□□□□ 0.72
HMGCRP04035 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HMGCRP04035 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC19.53■□□□□ 0.72
HMGCRP04035 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC19.53■□□□□ 0.72
HMGCRP04035 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HMGCRP04035 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HMGCRP04035 AP001059.3-201ENST00000619053 235 ntBASIC19.53■□□□□ 0.72
HMGCRP04035 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
HMGCRP04035 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HMGCRP04035 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
HMGCRP04035 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HMGCRP04035 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HMGCRP04035 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
HMGCRP04035 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HMGCRP04035 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HMGCRP04035 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC19.53■□□□□ 0.72
HMGCRP04035 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.53■□□□□ 0.72
HMGCRP04035 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
HMGCRP04035 AC104581.1-202ENST00000635932 2618 ntBASIC19.53■□□□□ 0.72
HMGCRP04035 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
HMGCRP04035 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.52■□□□□ 0.72
HMGCRP04035 TUBB3P1-201ENST00000405796 1332 ntBASIC19.52■□□□□ 0.72
HMGCRP04035 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC19.52■□□□□ 0.72
HMGCRP04035 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
HMGCRP04035 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HMGCRP04035 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HMGCRP04035 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.52■□□□□ 0.72
HMGCRP04035 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC19.52■□□□□ 0.72
HMGCRP04035 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HMGCRP04035 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.52■□□□□ 0.72
HMGCRP04035 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HMGCRP04035 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
HMGCRP04035 EDF1-203ENST00000371649 790 ntTSL 2 BASIC19.52■□□□□ 0.72
HMGCRP04035 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HMGCRP04035 CENPM-205ENST00000404067 905 ntTSL 3 BASIC19.52■□□□□ 0.72
HMGCRP04035 AC140658.5-201ENST00000438532 169 ntBASIC19.52■□□□□ 0.72
HMGCRP04035 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC19.52■□□□□ 0.72
HMGCRP04035 AC079140.1-201ENST00000508039 487 ntBASIC19.52■□□□□ 0.72
HMGCRP04035 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HMGCRP04035 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HMGCRP04035 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC19.52■□□□□ 0.72
HMGCRP04035 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HMGCRP04035 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC19.52■□□□□ 0.72
HMGCRP04035 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HMGCRP04035 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HMGCRP04035 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HMGCRP04035 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC19.52■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms