Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDRT1O95170 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CDRT1O95170 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.08
CDRT1O95170 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.58■□□□□ 0.08
CDRT1O95170 AC092171.3-201ENST00000610122 2651 ntBASIC15.58■□□□□ 0.08
CDRT1O95170 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDRT1O95170 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDRT1O95170 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.58■□□□□ 0.08
CDRT1O95170 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
CDRT1O95170 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
CDRT1O95170 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDRT1O95170 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CDRT1O95170 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
CDRT1O95170 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDRT1O95170 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC15.58■□□□□ 0.08
CDRT1O95170 GCSHP5-201ENST00000443090 522 ntBASIC15.58■□□□□ 0.08
CDRT1O95170 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CDRT1O95170 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CDRT1O95170 AP003041.3-201ENST00000527151 707 ntBASIC15.58■□□□□ 0.08
CDRT1O95170 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC15.58■□□□□ 0.08
CDRT1O95170 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC15.58■□□□□ 0.08
CDRT1O95170 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC15.58■□□□□ 0.08
CDRT1O95170 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDRT1O95170 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CDRT1O95170 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CDRT1O95170 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CDRT1O95170 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDRT1O95170 RNF216P1-203ENST00000404404 2427 ntBASIC15.58■□□□□ 0.08
CDRT1O95170 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CDRT1O95170 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDRT1O95170 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDRT1O95170 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDRT1O95170 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.58■□□□□ 0.08
CDRT1O95170 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDRT1O95170 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC15.58■□□□□ 0.08
CDRT1O95170 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC15.58■□□□□ 0.08
CDRT1O95170 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDRT1O95170 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDRT1O95170 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDRT1O95170 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
CDRT1O95170 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC15.58■□□□□ 0.08
CDRT1O95170 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDRT1O95170 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.58■□□□□ 0.08
CDRT1O95170 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.58■□□□□ 0.08
CDRT1O95170 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.58■□□□□ 0.08
CDRT1O95170 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
CDRT1O95170 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.08
CDRT1O95170 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDRT1O95170 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CDRT1O95170 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC15.57■□□□□ 0.08
CDRT1O95170 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CDRT1O95170 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
CDRT1O95170 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDRT1O95170 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDRT1O95170 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDRT1O95170 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDRT1O95170 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDRT1O95170 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.57■□□□□ 0.08
CDRT1O95170 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDRT1O95170 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDRT1O95170 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDRT1O95170 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDRT1O95170 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.57■□□□□ 0.08
CDRT1O95170 AC092068.3-201ENST00000587894 2016 ntBASIC15.57■□□□□ 0.08
CDRT1O95170 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CDRT1O95170 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC15.57■□□□□ 0.08
CDRT1O95170 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC15.57■□□□□ 0.08
CDRT1O95170 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDRT1O95170 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CDRT1O95170 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CDRT1O95170 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDRT1O95170 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDRT1O95170 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDRT1O95170 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDRT1O95170 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CDRT1O95170 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.57■□□□□ 0.08
CDRT1O95170 AC007950.2-201ENST00000615045 2347 ntBASIC15.57■□□□□ 0.08
CDRT1O95170 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDRT1O95170 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDRT1O95170 KRT8P7-201ENST00000533003 1432 ntBASIC15.57■□□□□ 0.08
CDRT1O95170 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDRT1O95170 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
CDRT1O95170 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC15.57■□□□□ 0.08
CDRT1O95170 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDRT1O95170 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
CDRT1O95170 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
CDRT1O95170 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.57■□□□□ 0.08
CDRT1O95170 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
CDRT1O95170 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
CDRT1O95170 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDRT1O95170 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC15.56■□□□□ 0.08
CDRT1O95170 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDRT1O95170 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDRT1O95170 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDRT1O95170 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.56■□□□□ 0.08
CDRT1O95170 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDRT1O95170 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDRT1O95170 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CDRT1O95170 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC15.56■□□□□ 0.08
CDRT1O95170 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms