Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
USH2AO75445 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC7.67□□□□□ -1.18
USH2AO75445 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC7.67□□□□□ -1.18
USH2AO75445 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
USH2AO75445 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC7.67□□□□□ -1.18
USH2AO75445 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
USH2AO75445 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC7.67□□□□□ -1.18
USH2AO75445 C2orf69P2-201ENST00000562032 1123 ntBASIC7.67□□□□□ -1.18
USH2AO75445 MPI-209ENST00000564003 1195 ntTSL 2 BASIC7.67□□□□□ -1.18
USH2AO75445 CASP16P-204ENST00000635032 809 ntBASIC7.67□□□□□ -1.18
USH2AO75445 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC7.67□□□□□ -1.18
USH2AO75445 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC7.67□□□□□ -1.18
USH2AO75445 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC7.67□□□□□ -1.18
USH2AO75445 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
USH2AO75445 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC7.67□□□□□ -1.18
USH2AO75445 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
USH2AO75445 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC7.67□□□□□ -1.18
USH2AO75445 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
USH2AO75445 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
USH2AO75445 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
USH2AO75445 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
USH2AO75445 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC7.67□□□□□ -1.18
USH2AO75445 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC7.67□□□□□ -1.18
USH2AO75445 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
USH2AO75445 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
USH2AO75445 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
USH2AO75445 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
USH2AO75445 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC7.67□□□□□ -1.18
USH2AO75445 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC7.67□□□□□ -1.18
USH2AO75445 TEX28P1-201ENST00000613479 1221 ntBASIC7.67□□□□□ -1.18
USH2AO75445 TEX28P2-201ENST00000617764 1221 ntBASIC7.67□□□□□ -1.18
USH2AO75445 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
USH2AO75445 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
USH2AO75445 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC7.67□□□□□ -1.18
USH2AO75445 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC7.67□□□□□ -1.18
USH2AO75445 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC7.67□□□□□ -1.18
USH2AO75445 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
USH2AO75445 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
USH2AO75445 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
USH2AO75445 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC7.66□□□□□ -1.18
USH2AO75445 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC7.66□□□□□ -1.18
USH2AO75445 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
USH2AO75445 AC087499.6-201ENST00000411576 835 ntBASIC7.66□□□□□ -1.18
USH2AO75445 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC7.66□□□□□ -1.18
USH2AO75445 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC7.66□□□□□ -1.18
USH2AO75445 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC7.66□□□□□ -1.18
USH2AO75445 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
USH2AO75445 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
USH2AO75445 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
USH2AO75445 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC7.66□□□□□ -1.18
USH2AO75445 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC7.66□□□□□ -1.18
USH2AO75445 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
USH2AO75445 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
USH2AO75445 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC7.66□□□□□ -1.18
USH2AO75445 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
USH2AO75445 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
USH2AO75445 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC7.66□□□□□ -1.18
USH2AO75445 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC7.66□□□□□ -1.18
USH2AO75445 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
USH2AO75445 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
USH2AO75445 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC7.66□□□□□ -1.18
USH2AO75445 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
USH2AO75445 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC7.66□□□□□ -1.18
USH2AO75445 KLF4P1-201ENST00000412782 1185 ntBASIC7.66□□□□□ -1.18
USH2AO75445 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC7.66□□□□□ -1.18
USH2AO75445 STOM-203ENST00000538954 1257 ntTSL 5 BASIC7.66□□□□□ -1.18
USH2AO75445 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC7.66□□□□□ -1.18
USH2AO75445 SPCS2P2-201ENST00000603270 608 ntBASIC7.66□□□□□ -1.18
USH2AO75445 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
USH2AO75445 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC7.66□□□□□ -1.18
USH2AO75445 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
USH2AO75445 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC7.66□□□□□ -1.18
USH2AO75445 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC7.66□□□□□ -1.18
USH2AO75445 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC7.66□□□□□ -1.18
USH2AO75445 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC7.66□□□□□ -1.18
USH2AO75445 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
USH2AO75445 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC7.66□□□□□ -1.18
USH2AO75445 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
USH2AO75445 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC7.66□□□□□ -1.18
USH2AO75445 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
USH2AO75445 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC7.66□□□□□ -1.18
USH2AO75445 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC7.66□□□□□ -1.18
USH2AO75445 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
USH2AO75445 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC7.66□□□□□ -1.18
USH2AO75445 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC7.66□□□□□ -1.18
USH2AO75445 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC7.66□□□□□ -1.18
USH2AO75445 HLA-V-204ENST00000476601 1289 ntBASIC7.66□□□□□ -1.18
USH2AO75445 SPDYE18-201ENST00000510091 1050 ntBASIC7.66□□□□□ -1.18
USH2AO75445 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC7.66□□□□□ -1.18
USH2AO75445 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
USH2AO75445 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC7.66□□□□□ -1.18
USH2AO75445 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
USH2AO75445 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC7.66□□□□□ -1.18
USH2AO75445 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
USH2AO75445 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
USH2AO75445 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
USH2AO75445 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
USH2AO75445 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC7.66□□□□□ -1.18
USH2AO75445 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC7.66□□□□□ -1.18
USH2AO75445 CD81-207ENST00000481687 890 ntTSL 2 BASIC7.66□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms