Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.53■□□□□ 0.72
ACTN4O43707 ABR-204ENST00000543210 1049 ntTSL 2 BASIC19.53■□□□□ 0.72
ACTN4O43707 TPSP2-201ENST00000561760 610 ntBASIC19.53■□□□□ 0.72
ACTN4O43707 AC111152.3-201ENST00000569699 673 ntBASIC19.53■□□□□ 0.72
ACTN4O43707 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.53■□□□□ 0.72
ACTN4O43707 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.53■□□□□ 0.72
ACTN4O43707 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ACTN4O43707 AD001527.2-201ENST00000622994 785 ntBASIC19.53■□□□□ 0.72
ACTN4O43707 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ACTN4O43707 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ACTN4O43707 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC19.53■□□□□ 0.72
ACTN4O43707 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC19.53■□□□□ 0.72
ACTN4O43707 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
ACTN4O43707 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC19.53■□□□□ 0.72
ACTN4O43707 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
ACTN4O43707 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ACTN4O43707 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC19.53■□□□□ 0.72
ACTN4O43707 AC132938.5-201ENST00000624980 1813 ntBASIC19.53■□□□□ 0.72
ACTN4O43707 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ACTN4O43707 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
ACTN4O43707 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
ACTN4O43707 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ACTN4O43707 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC19.52■□□□□ 0.72
ACTN4O43707 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ACTN4O43707 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ACTN4O43707 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC19.52■□□□□ 0.72
ACTN4O43707 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
ACTN4O43707 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ACTN4O43707 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ACTN4O43707 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC19.52■□□□□ 0.72
ACTN4O43707 AC105020.1-201ENST00000435356 2205 ntBASIC19.52■□□□□ 0.72
ACTN4O43707 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC19.52■□□□□ 0.72
ACTN4O43707 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
ACTN4O43707 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC19.52■□□□□ 0.72
ACTN4O43707 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ACTN4O43707 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
ACTN4O43707 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC19.52■□□□□ 0.72
ACTN4O43707 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ACTN4O43707 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC19.52■□□□□ 0.72
ACTN4O43707 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ACTN4O43707 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ACTN4O43707 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
ACTN4O43707 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
ACTN4O43707 PCED1CP-201ENST00000419887 785 ntBASIC19.52■□□□□ 0.72
ACTN4O43707 DRAXINP1-201ENST00000437611 948 ntBASIC19.52■□□□□ 0.72
ACTN4O43707 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC19.52■□□□□ 0.72
ACTN4O43707 DANCR-204ENST00000444958 709 ntTSL 3 BASIC19.52■□□□□ 0.72
ACTN4O43707 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC19.52■□□□□ 0.72
ACTN4O43707 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
ACTN4O43707 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC19.52■□□□□ 0.72
ACTN4O43707 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
ACTN4O43707 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
ACTN4O43707 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
ACTN4O43707 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
ACTN4O43707 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
ACTN4O43707 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
ACTN4O43707 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
ACTN4O43707 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
ACTN4O43707 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ACTN4O43707 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ACTN4O43707 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
ACTN4O43707 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
ACTN4O43707 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ACTN4O43707 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
ACTN4O43707 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ACTN4O43707 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ACTN4O43707 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ACTN4O43707 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
ACTN4O43707 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ACTN4O43707 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
ACTN4O43707 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
ACTN4O43707 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
ACTN4O43707 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ACTN4O43707 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ACTN4O43707 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.51■□□□□ 0.71
ACTN4O43707 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.51■□□□□ 0.71
ACTN4O43707 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.51■□□□□ 0.71
ACTN4O43707 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19.51■□□□□ 0.71
ACTN4O43707 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.51■□□□□ 0.71
ACTN4O43707 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.51■□□□□ 0.71
ACTN4O43707 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.51■□□□□ 0.71
ACTN4O43707 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.51■□□□□ 0.71
ACTN4O43707 TP73-AS1-210ENST00000637775 1455 ntBASIC19.51■□□□□ 0.71
ACTN4O43707 AC009336.1-201ENST00000608941 1553 ntBASIC19.51■□□□□ 0.71
ACTN4O43707 AL135999.2-201ENST00000622438 1686 ntBASIC19.51■□□□□ 0.71
ACTN4O43707 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ACTN4O43707 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ACTN4O43707 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC19.51■□□□□ 0.71
ACTN4O43707 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ACTN4O43707 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ACTN4O43707 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ACTN4O43707 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ACTN4O43707 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
ACTN4O43707 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC19.51■□□□□ 0.71
ACTN4O43707 KRT18P1-202ENST00000452408 1331 ntBASIC19.51■□□□□ 0.71
ACTN4O43707 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ACTN4O43707 AC124067.4-201ENST00000519691 2379 ntBASIC19.5■□□□□ 0.71
ACTN4O43707 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ACTN4O43707 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
ACTN4O43707 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms