Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDH17O14917 AC103564.2-201ENST00000432853 1299 ntBASIC16.66■□□□□ 0.26
PCDH17O14917 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDH17O14917 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.66■□□□□ 0.26
PCDH17O14917 ABCD1P5-201ENST00000445663 754 ntBASIC16.66■□□□□ 0.26
PCDH17O14917 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
PCDH17O14917 AC132008.2-207ENST00000454517 770 ntBASIC16.66■□□□□ 0.26
PCDH17O14917 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
PCDH17O14917 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
PCDH17O14917 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PCDH17O14917 AL355877.3-201ENST00000622820 899 ntBASIC16.66■□□□□ 0.26
PCDH17O14917 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PCDH17O14917 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
PCDH17O14917 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.66■□□□□ 0.26
PCDH17O14917 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.66■□□□□ 0.26
PCDH17O14917 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
PCDH17O14917 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
PCDH17O14917 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
PCDH17O14917 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.66■□□□□ 0.26
PCDH17O14917 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCDH17O14917 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDH17O14917 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDH17O14917 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PCDH17O14917 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDH17O14917 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDH17O14917 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
PCDH17O14917 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCDH17O14917 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCDH17O14917 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.65■□□□□ 0.26
PCDH17O14917 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
PCDH17O14917 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
PCDH17O14917 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
PCDH17O14917 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.65■□□□□ 0.26
PCDH17O14917 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDH17O14917 PKD1P1-201ENST00000458669 6805 ntBASIC16.65■□□□□ 0.26
PCDH17O14917 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDH17O14917 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDH17O14917 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCDH17O14917 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDH17O14917 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDH17O14917 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDH17O14917 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDH17O14917 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDH17O14917 AL022342.1-201ENST00000400363 863 ntBASIC16.65■□□□□ 0.26
PCDH17O14917 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.65■□□□□ 0.26
PCDH17O14917 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDH17O14917 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.65■□□□□ 0.26
PCDH17O14917 AC008608.2-201ENST00000606089 416 ntBASIC16.65■□□□□ 0.26
PCDH17O14917 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDH17O14917 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.65■□□□□ 0.26
PCDH17O14917 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.65■□□□□ 0.26
PCDH17O14917 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
PCDH17O14917 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.65■□□□□ 0.26
PCDH17O14917 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDH17O14917 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDH17O14917 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDH17O14917 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDH17O14917 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDH17O14917 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
PCDH17O14917 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.65■□□□□ 0.26
PCDH17O14917 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.65■□□□□ 0.26
PCDH17O14917 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.65■□□□□ 0.26
PCDH17O14917 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.64■□□□□ 0.26
PCDH17O14917 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
PCDH17O14917 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.26
PCDH17O14917 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
PCDH17O14917 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDH17O14917 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDH17O14917 AC022211.2-201ENST00000585075 2527 ntBASIC16.64■□□□□ 0.25
PCDH17O14917 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
PCDH17O14917 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDH17O14917 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDH17O14917 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDH17O14917 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDH17O14917 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDH17O14917 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDH17O14917 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.64■□□□□ 0.25
PCDH17O14917 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDH17O14917 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
PCDH17O14917 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDH17O14917 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.64■□□□□ 0.25
PCDH17O14917 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.64■□□□□ 0.25
PCDH17O14917 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.64■□□□□ 0.25
PCDH17O14917 AF238378.1-201ENST00000526806 358 ntBASIC16.64■□□□□ 0.25
PCDH17O14917 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.64■□□□□ 0.25
PCDH17O14917 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDH17O14917 SLC25A6P4-201ENST00000586535 553 ntBASIC16.64■□□□□ 0.25
PCDH17O14917 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.64■□□□□ 0.25
PCDH17O14917 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDH17O14917 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.64■□□□□ 0.25
PCDH17O14917 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.64■□□□□ 0.25
PCDH17O14917 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDH17O14917 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDH17O14917 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
PCDH17O14917 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
PCDH17O14917 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.64■□□□□ 0.25
PCDH17O14917 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
PCDH17O14917 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.64■□□□□ 0.25
PCDH17O14917 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
PCDH17O14917 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms