Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
UBFD1O14562 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
UBFD1O14562 AC092171.3-201ENST00000610122 2651 ntBASIC16.91■□□□□ 0.3
UBFD1O14562 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
UBFD1O14562 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
UBFD1O14562 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
UBFD1O14562 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
UBFD1O14562 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
UBFD1O14562 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
UBFD1O14562 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
UBFD1O14562 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
UBFD1O14562 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
UBFD1O14562 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
UBFD1O14562 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
UBFD1O14562 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.9■□□□□ 0.3
UBFD1O14562 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
UBFD1O14562 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
UBFD1O14562 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
UBFD1O14562 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
UBFD1O14562 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.9■□□□□ 0.3
UBFD1O14562 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
UBFD1O14562 AC122714.2-201ENST00000502787 707 ntBASIC16.9■□□□□ 0.3
UBFD1O14562 AC022616.7-201ENST00000525383 220 ntBASIC16.9■□□□□ 0.3
UBFD1O14562 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
UBFD1O14562 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
UBFD1O14562 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.9■□□□□ 0.3
UBFD1O14562 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
UBFD1O14562 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.9■□□□□ 0.3
UBFD1O14562 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.9■□□□□ 0.3
UBFD1O14562 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.9■□□□□ 0.3
UBFD1O14562 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
UBFD1O14562 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
UBFD1O14562 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
UBFD1O14562 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
UBFD1O14562 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
UBFD1O14562 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
UBFD1O14562 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
UBFD1O14562 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.9■□□□□ 0.3
UBFD1O14562 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.9■□□□□ 0.3
UBFD1O14562 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
UBFD1O14562 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
UBFD1O14562 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.9■□□□□ 0.3
UBFD1O14562 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
UBFD1O14562 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
UBFD1O14562 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
UBFD1O14562 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
UBFD1O14562 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UBFD1O14562 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.89■□□□□ 0.29
UBFD1O14562 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UBFD1O14562 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UBFD1O14562 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UBFD1O14562 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
UBFD1O14562 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
UBFD1O14562 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.89■□□□□ 0.29
UBFD1O14562 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UBFD1O14562 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.89■□□□□ 0.29
UBFD1O14562 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.89■□□□□ 0.29
UBFD1O14562 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.89■□□□□ 0.29
UBFD1O14562 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.89■□□□□ 0.29
UBFD1O14562 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.89■□□□□ 0.29
UBFD1O14562 NDUFV2-AS1-203ENST00000608008 779 ntBASIC16.89■□□□□ 0.29
UBFD1O14562 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.89■□□□□ 0.29
UBFD1O14562 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
UBFD1O14562 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UBFD1O14562 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
UBFD1O14562 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
UBFD1O14562 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
UBFD1O14562 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UBFD1O14562 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
UBFD1O14562 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
UBFD1O14562 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UBFD1O14562 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.89■□□□□ 0.29
UBFD1O14562 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
UBFD1O14562 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.89■□□□□ 0.29
UBFD1O14562 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.89■□□□□ 0.29
UBFD1O14562 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
UBFD1O14562 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
UBFD1O14562 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
UBFD1O14562 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
UBFD1O14562 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
UBFD1O14562 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.88■□□□□ 0.29
UBFD1O14562 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
UBFD1O14562 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.88■□□□□ 0.29
UBFD1O14562 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
UBFD1O14562 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
UBFD1O14562 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
UBFD1O14562 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.88■□□□□ 0.29
UBFD1O14562 KRT18P21-201ENST00000515767 1272 ntBASIC16.88■□□□□ 0.29
UBFD1O14562 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.88■□□□□ 0.29
UBFD1O14562 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.88■□□□□ 0.29
UBFD1O14562 AC011498.5-201ENST00000592027 486 ntBASIC16.88■□□□□ 0.29
UBFD1O14562 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
UBFD1O14562 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
UBFD1O14562 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.88■□□□□ 0.29
UBFD1O14562 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.88■□□□□ 0.29
UBFD1O14562 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
UBFD1O14562 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
UBFD1O14562 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
UBFD1O14562 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
UBFD1O14562 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms