Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CFAP99D6REC4 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
CFAP99D6REC4 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.41■□□□□ 0.38
CFAP99D6REC4 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
CFAP99D6REC4 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
CFAP99D6REC4 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.41■□□□□ 0.38
CFAP99D6REC4 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.41■□□□□ 0.38
CFAP99D6REC4 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.4■□□□□ 0.38
CFAP99D6REC4 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
CFAP99D6REC4 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CFAP99D6REC4 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CFAP99D6REC4 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.4■□□□□ 0.38
CFAP99D6REC4 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC17.4■□□□□ 0.38
CFAP99D6REC4 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
CFAP99D6REC4 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CFAP99D6REC4 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.4■□□□□ 0.38
CFAP99D6REC4 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CFAP99D6REC4 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.4■□□□□ 0.38
CFAP99D6REC4 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
CFAP99D6REC4 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.4■□□□□ 0.38
CFAP99D6REC4 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.4■□□□□ 0.38
CFAP99D6REC4 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CFAP99D6REC4 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC17.4■□□□□ 0.38
CFAP99D6REC4 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC17.4■□□□□ 0.38
CFAP99D6REC4 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CFAP99D6REC4 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.4■□□□□ 0.38
CFAP99D6REC4 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.4■□□□□ 0.38
CFAP99D6REC4 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.4■□□□□ 0.38
CFAP99D6REC4 GZMM-202ENST00000592501 941 ntTSL 3 BASIC17.4■□□□□ 0.38
CFAP99D6REC4 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.4■□□□□ 0.38
CFAP99D6REC4 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC17.4■□□□□ 0.38
CFAP99D6REC4 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.4■□□□□ 0.38
CFAP99D6REC4 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CFAP99D6REC4 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CFAP99D6REC4 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CFAP99D6REC4 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CFAP99D6REC4 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
CFAP99D6REC4 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.4■□□□□ 0.38
CFAP99D6REC4 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CFAP99D6REC4 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
CFAP99D6REC4 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.4■□□□□ 0.38
CFAP99D6REC4 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CFAP99D6REC4 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CFAP99D6REC4 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CFAP99D6REC4 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CFAP99D6REC4 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CFAP99D6REC4 PCDHA12-202ENST00000613593 2588 ntBASIC17.39■□□□□ 0.38
CFAP99D6REC4 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CFAP99D6REC4 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
CFAP99D6REC4 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CFAP99D6REC4 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.39■□□□□ 0.37
CFAP99D6REC4 AC084018.2-201ENST00000613093 2607 ntBASIC17.39■□□□□ 0.37
CFAP99D6REC4 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CFAP99D6REC4 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CFAP99D6REC4 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CFAP99D6REC4 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CFAP99D6REC4 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
CFAP99D6REC4 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CFAP99D6REC4 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CFAP99D6REC4 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.39■□□□□ 0.37
CFAP99D6REC4 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CFAP99D6REC4 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CFAP99D6REC4 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.39■□□□□ 0.37
CFAP99D6REC4 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CFAP99D6REC4 KRT18P31-201ENST00000506277 1292 ntBASIC17.39■□□□□ 0.37
CFAP99D6REC4 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.39■□□□□ 0.37
CFAP99D6REC4 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.39■□□□□ 0.37
CFAP99D6REC4 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CFAP99D6REC4 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CFAP99D6REC4 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.39■□□□□ 0.37
CFAP99D6REC4 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.39■□□□□ 0.37
CFAP99D6REC4 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CFAP99D6REC4 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.39■□□□□ 0.37
CFAP99D6REC4 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CFAP99D6REC4 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CFAP99D6REC4 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.39■□□□□ 0.37
CFAP99D6REC4 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CFAP99D6REC4 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CFAP99D6REC4 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.39■□□□□ 0.37
CFAP99D6REC4 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CFAP99D6REC4 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CFAP99D6REC4 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CFAP99D6REC4 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CFAP99D6REC4 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CFAP99D6REC4 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CFAP99D6REC4 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.38■□□□□ 0.37
CFAP99D6REC4 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CFAP99D6REC4 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CFAP99D6REC4 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CFAP99D6REC4 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CFAP99D6REC4 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.38■□□□□ 0.37
CFAP99D6REC4 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CFAP99D6REC4 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CFAP99D6REC4 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CFAP99D6REC4 TSPY19P-201ENST00000418461 509 ntBASIC17.38■□□□□ 0.37
CFAP99D6REC4 TSPY18P-201ENST00000441642 509 ntBASIC17.38■□□□□ 0.37
CFAP99D6REC4 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.38■□□□□ 0.37
CFAP99D6REC4 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.38■□□□□ 0.37
CFAP99D6REC4 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.38■□□□□ 0.37
CFAP99D6REC4 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms