Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
TBC1D3FA6NER0 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC17.33■□□□□ 0.36
TBC1D3FA6NER0 GGTLC5P-201ENST00000617623 998 ntBASIC17.33■□□□□ 0.36
TBC1D3FA6NER0 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
TBC1D3FA6NER0 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TBC1D3FA6NER0 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TBC1D3FA6NER0 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.33■□□□□ 0.36
TBC1D3FA6NER0 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.33■□□□□ 0.36
TBC1D3FA6NER0 AC135050.7-201ENST00000624508 2218 ntBASIC17.33■□□□□ 0.36
TBC1D3FA6NER0 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
TBC1D3FA6NER0 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TBC1D3FA6NER0 BICD1-207ENST00000551848 1962 ntBASIC17.33■□□□□ 0.36
TBC1D3FA6NER0 REXO1L11P-201ENST00000620964 1927 ntBASIC17.33■□□□□ 0.36
TBC1D3FA6NER0 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
TBC1D3FA6NER0 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TBC1D3FA6NER0 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TBC1D3FA6NER0 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.32■□□□□ 0.36
TBC1D3FA6NER0 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TBC1D3FA6NER0 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.32■□□□□ 0.36
TBC1D3FA6NER0 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TBC1D3FA6NER0 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TBC1D3FA6NER0 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TBC1D3FA6NER0 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TBC1D3FA6NER0 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
TBC1D3FA6NER0 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TBC1D3FA6NER0 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TBC1D3FA6NER0 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TBC1D3FA6NER0 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TBC1D3FA6NER0 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TBC1D3FA6NER0 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
TBC1D3FA6NER0 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TBC1D3FA6NER0 AP002414.1-201ENST00000391405 1147 ntBASIC17.32■□□□□ 0.36
TBC1D3FA6NER0 AC092183.1-201ENST00000469884 875 ntBASIC17.32■□□□□ 0.36
TBC1D3FA6NER0 AC018845.2-201ENST00000568326 409 ntBASIC17.32■□□□□ 0.36
TBC1D3FA6NER0 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC17.32■□□□□ 0.36
TBC1D3FA6NER0 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
TBC1D3FA6NER0 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
TBC1D3FA6NER0 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.32■□□□□ 0.36
TBC1D3FA6NER0 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
TBC1D3FA6NER0 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.32■□□□□ 0.36
TBC1D3FA6NER0 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TBC1D3FA6NER0 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TBC1D3FA6NER0 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TBC1D3FA6NER0 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TBC1D3FA6NER0 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.32■□□□□ 0.36
TBC1D3FA6NER0 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.32■□□□□ 0.36
TBC1D3FA6NER0 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
TBC1D3FA6NER0 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TBC1D3FA6NER0 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.31■□□□□ 0.36
TBC1D3FA6NER0 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.31■□□□□ 0.36
TBC1D3FA6NER0 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TBC1D3FA6NER0 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TBC1D3FA6NER0 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TBC1D3FA6NER0 PI4KAP1-204ENST00000612579 1703 ntBASIC17.31■□□□□ 0.36
TBC1D3FA6NER0 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TBC1D3FA6NER0 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TBC1D3FA6NER0 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TBC1D3FA6NER0 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.31■□□□□ 0.36
TBC1D3FA6NER0 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.31■□□□□ 0.36
TBC1D3FA6NER0 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.31■□□□□ 0.36
TBC1D3FA6NER0 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC17.31■□□□□ 0.36
TBC1D3FA6NER0 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TBC1D3FA6NER0 HCG4B-203ENST00000450128 991 ntBASIC17.31■□□□□ 0.36
TBC1D3FA6NER0 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.31■□□□□ 0.36
TBC1D3FA6NER0 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TBC1D3FA6NER0 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.31■□□□□ 0.36
TBC1D3FA6NER0 CD63-210ENST00000550776 870 ntTSL 5 BASIC17.31■□□□□ 0.36
TBC1D3FA6NER0 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
TBC1D3FA6NER0 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.31■□□□□ 0.36
TBC1D3FA6NER0 AC079781.4-201ENST00000641908 219 ntBASIC17.31■□□□□ 0.36
TBC1D3FA6NER0 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TBC1D3FA6NER0 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TBC1D3FA6NER0 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TBC1D3FA6NER0 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.31■□□□□ 0.36
TBC1D3FA6NER0 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TBC1D3FA6NER0 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TBC1D3FA6NER0 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.31■□□□□ 0.36
TBC1D3FA6NER0 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.31■□□□□ 0.36
TBC1D3FA6NER0 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TBC1D3FA6NER0 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.31■□□□□ 0.36
TBC1D3FA6NER0 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.31■□□□□ 0.36
TBC1D3FA6NER0 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
TBC1D3FA6NER0 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
TBC1D3FA6NER0 AC046185.3-201ENST00000623228 1824 ntBASIC17.31■□□□□ 0.36
TBC1D3FA6NER0 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
TBC1D3FA6NER0 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TBC1D3FA6NER0 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TBC1D3FA6NER0 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TBC1D3FA6NER0 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
TBC1D3FA6NER0 AC002310.6-201ENST00000624451 1377 ntBASIC17.3■□□□□ 0.36
TBC1D3FA6NER0 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.3■□□□□ 0.36
TBC1D3FA6NER0 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.3■□□□□ 0.36
TBC1D3FA6NER0 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TBC1D3FA6NER0 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.3■□□□□ 0.36
TBC1D3FA6NER0 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TBC1D3FA6NER0 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.3■□□□□ 0.36
TBC1D3FA6NER0 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TBC1D3FA6NER0 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TBC1D3FA6NER0 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.3■□□□□ 0.36
TBC1D3FA6NER0 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms