Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC18.93■□□□□ 0.62
CCDC66A2RUB6 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC66A2RUB6 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC66A2RUB6 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC66A2RUB6 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC66A2RUB6 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.93■□□□□ 0.62
CCDC66A2RUB6 AL596275.1-201ENST00000423464 877 ntBASIC18.93■□□□□ 0.62
CCDC66A2RUB6 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC66A2RUB6 MIR4497-201ENST00000583208 89 ntBASIC18.93■□□□□ 0.62
CCDC66A2RUB6 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.93■□□□□ 0.62
CCDC66A2RUB6 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
CCDC66A2RUB6 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC66A2RUB6 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC66A2RUB6 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CCDC66A2RUB6 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC66A2RUB6 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC66A2RUB6 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC66A2RUB6 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CCDC66A2RUB6 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC66A2RUB6 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC66A2RUB6 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC18.93■□□□□ 0.62
CCDC66A2RUB6 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC66A2RUB6 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC66A2RUB6 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC66A2RUB6 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC66A2RUB6 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC66A2RUB6 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC66A2RUB6 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC66A2RUB6 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC66A2RUB6 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC66A2RUB6 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC66A2RUB6 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC66A2RUB6 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.92■□□□□ 0.62
CCDC66A2RUB6 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC66A2RUB6 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC66A2RUB6 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC66A2RUB6 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC66A2RUB6 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CCDC66A2RUB6 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC66A2RUB6 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CCDC66A2RUB6 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC66A2RUB6 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC66A2RUB6 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC66A2RUB6 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC66A2RUB6 AL355075.4-201ENST00000554988 638 ntBASIC18.92■□□□□ 0.62
CCDC66A2RUB6 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC66A2RUB6 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC66A2RUB6 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC66A2RUB6 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC66A2RUB6 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC66A2RUB6 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC66A2RUB6 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC66A2RUB6 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC66A2RUB6 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.92■□□□□ 0.62
CCDC66A2RUB6 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC66A2RUB6 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC18.92■□□□□ 0.62
CCDC66A2RUB6 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC18.92■□□□□ 0.62
CCDC66A2RUB6 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC66A2RUB6 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CCDC66A2RUB6 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC66A2RUB6 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC66A2RUB6 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC66A2RUB6 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC66A2RUB6 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC66A2RUB6 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC66A2RUB6 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC66A2RUB6 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CCDC66A2RUB6 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC66A2RUB6 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC66A2RUB6 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC66A2RUB6 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC66A2RUB6 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC66A2RUB6 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC66A2RUB6 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC66A2RUB6 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC66A2RUB6 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC66A2RUB6 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC66A2RUB6 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC18.91■□□□□ 0.62
CCDC66A2RUB6 STK24-203ENST00000397517 4578 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC66A2RUB6 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
CCDC66A2RUB6 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC66A2RUB6 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
CCDC66A2RUB6 CES3-203ENST00000543856 3178 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC66A2RUB6 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC66A2RUB6 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC66A2RUB6 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.91■□□□□ 0.62
CCDC66A2RUB6 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC66A2RUB6 AL512604.3-201ENST00000569583 964 ntBASIC18.91■□□□□ 0.62
CCDC66A2RUB6 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CCDC66A2RUB6 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC66A2RUB6 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CCDC66A2RUB6 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC66A2RUB6 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC66A2RUB6 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC66A2RUB6 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC66A2RUB6 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC66A2RUB6 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC66A2RUB6 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC66A2RUB6 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC66A2RUB6 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms