Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRGV1A0A0A0MS02 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TRGV1A0A0A0MS02 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRGV1A0A0A0MS02 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRGV1A0A0A0MS02 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRGV1A0A0A0MS02 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRGV1A0A0A0MS02 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
TRGV1A0A0A0MS02 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC12.68□□□□□ -0.38
TRGV1A0A0A0MS02 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TRGV1A0A0A0MS02 TMED1-207ENST00000591695 809 ntTSL 5 BASIC12.68□□□□□ -0.38
TRGV1A0A0A0MS02 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC12.68□□□□□ -0.38
TRGV1A0A0A0MS02 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
TRGV1A0A0A0MS02 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRGV1A0A0A0MS02 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC12.68□□□□□ -0.38
TRGV1A0A0A0MS02 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRGV1A0A0A0MS02 PC-208ENST00000529047 1607 ntTSL 3 BASIC12.68□□□□□ -0.38
TRGV1A0A0A0MS02 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRGV1A0A0A0MS02 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRGV1A0A0A0MS02 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRGV1A0A0A0MS02 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC12.68□□□□□ -0.38
TRGV1A0A0A0MS02 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC12.68□□□□□ -0.38
TRGV1A0A0A0MS02 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRGV1A0A0A0MS02 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
TRGV1A0A0A0MS02 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TRGV1A0A0A0MS02 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRGV1A0A0A0MS02 IER3-202ENST00000376377 1350 ntBASIC12.68□□□□□ -0.38
TRGV1A0A0A0MS02 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRGV1A0A0A0MS02 PP12613-201ENST00000424958 2230 ntBASIC12.68□□□□□ -0.38
TRGV1A0A0A0MS02 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC12.68□□□□□ -0.38
TRGV1A0A0A0MS02 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV1A0A0A0MS02 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV1A0A0A0MS02 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
TRGV1A0A0A0MS02 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV1A0A0A0MS02 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV1A0A0A0MS02 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV1A0A0A0MS02 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC12.67□□□□□ -0.38
TRGV1A0A0A0MS02 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC12.67□□□□□ -0.38
TRGV1A0A0A0MS02 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV1A0A0A0MS02 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
TRGV1A0A0A0MS02 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV1A0A0A0MS02 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
TRGV1A0A0A0MS02 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV1A0A0A0MS02 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
TRGV1A0A0A0MS02 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC12.67□□□□□ -0.38
TRGV1A0A0A0MS02 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC12.67□□□□□ -0.38
TRGV1A0A0A0MS02 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV1A0A0A0MS02 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV1A0A0A0MS02 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV1A0A0A0MS02 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC12.67□□□□□ -0.38
TRGV1A0A0A0MS02 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV1A0A0A0MS02 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV1A0A0A0MS02 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV1A0A0A0MS02 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV1A0A0A0MS02 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV1A0A0A0MS02 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV1A0A0A0MS02 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
TRGV1A0A0A0MS02 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
TRGV1A0A0A0MS02 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV1A0A0A0MS02 PCED1CP-201ENST00000419887 785 ntBASIC12.67□□□□□ -0.38
TRGV1A0A0A0MS02 AC096633.1-201ENST00000422446 749 ntBASIC12.67□□□□□ -0.38
TRGV1A0A0A0MS02 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC12.67□□□□□ -0.38
TRGV1A0A0A0MS02 CHCHD2P8-201ENST00000429873 447 ntBASIC12.67□□□□□ -0.38
TRGV1A0A0A0MS02 FAM86EP-206ENST00000510506 987 ntBASIC12.67□□□□□ -0.38
TRGV1A0A0A0MS02 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC12.67□□□□□ -0.38
TRGV1A0A0A0MS02 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV1A0A0A0MS02 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC12.67□□□□□ -0.38
TRGV1A0A0A0MS02 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
TRGV1A0A0A0MS02 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
TRGV1A0A0A0MS02 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC12.67□□□□□ -0.38
TRGV1A0A0A0MS02 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC12.67□□□□□ -0.38
TRGV1A0A0A0MS02 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV1A0A0A0MS02 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV1A0A0A0MS02 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV1A0A0A0MS02 AC063926.3-201ENST00000624734 5658 ntBASIC12.67□□□□□ -0.38
TRGV1A0A0A0MS02 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV1A0A0A0MS02 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV1A0A0A0MS02 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV1A0A0A0MS02 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC12.67□□□□□ -0.38
TRGV1A0A0A0MS02 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV1A0A0A0MS02 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV1A0A0A0MS02 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC12.67□□□□□ -0.38
TRGV1A0A0A0MS02 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV1A0A0A0MS02 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRGV1A0A0A0MS02 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TRGV1A0A0A0MS02 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
TRGV1A0A0A0MS02 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRGV1A0A0A0MS02 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC12.66□□□□□ -0.38
TRGV1A0A0A0MS02 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TRGV1A0A0A0MS02 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRGV1A0A0A0MS02 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
TRGV1A0A0A0MS02 KRT18P1-202ENST00000452408 1331 ntBASIC12.66□□□□□ -0.38
TRGV1A0A0A0MS02 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
TRGV1A0A0A0MS02 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRGV1A0A0A0MS02 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRGV1A0A0A0MS02 AC012313.1-201ENST00000593393 3059 ntBASIC12.66□□□□□ -0.38
TRGV1A0A0A0MS02 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRGV1A0A0A0MS02 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC12.66□□□□□ -0.38
TRGV1A0A0A0MS02 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
TRGV1A0A0A0MS02 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC12.66□□□□□ -0.38
TRGV1A0A0A0MS02 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
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