Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGB3Q9Y5G1 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGB3Q9Y5G1 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
PCDHGB3Q9Y5G1 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.6■□□□□ 0.25
PCDHGB3Q9Y5G1 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGB3Q9Y5G1 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGB3Q9Y5G1 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
PCDHGB3Q9Y5G1 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGB3Q9Y5G1 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PCDHGB3Q9Y5G1 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGB3Q9Y5G1 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.59■□□□□ 0.25
PCDHGB3Q9Y5G1 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.59■□□□□ 0.25
PCDHGB3Q9Y5G1 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGB3Q9Y5G1 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGB3Q9Y5G1 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGB3Q9Y5G1 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.59■□□□□ 0.25
PCDHGB3Q9Y5G1 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGB3Q9Y5G1 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
PCDHGB3Q9Y5G1 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGB3Q9Y5G1 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGB3Q9Y5G1 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGB3Q9Y5G1 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
PCDHGB3Q9Y5G1 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
PCDHGB3Q9Y5G1 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGB3Q9Y5G1 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGB3Q9Y5G1 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGB3Q9Y5G1 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGB3Q9Y5G1 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGB3Q9Y5G1 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.59■□□□□ 0.25
PCDHGB3Q9Y5G1 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.59■□□□□ 0.25
PCDHGB3Q9Y5G1 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
PCDHGB3Q9Y5G1 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.59■□□□□ 0.25
PCDHGB3Q9Y5G1 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.59■□□□□ 0.25
PCDHGB3Q9Y5G1 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGB3Q9Y5G1 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.59■□□□□ 0.25
PCDHGB3Q9Y5G1 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGB3Q9Y5G1 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
PCDHGB3Q9Y5G1 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGB3Q9Y5G1 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
PCDHGB3Q9Y5G1 AC016734.2-201ENST00000624325 1377 ntBASIC16.59■□□□□ 0.25
PCDHGB3Q9Y5G1 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGB3Q9Y5G1 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
PCDHGB3Q9Y5G1 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
PCDHGB3Q9Y5G1 HLA-J-201ENST00000462773 1622 ntBASIC16.59■□□□□ 0.25
PCDHGB3Q9Y5G1 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
PCDHGB3Q9Y5G1 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
PCDHGB3Q9Y5G1 LINC00304-203ENST00000565008 1864 ntBASIC16.59■□□□□ 0.25
PCDHGB3Q9Y5G1 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PCDHGB3Q9Y5G1 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.25
PCDHGB3Q9Y5G1 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PCDHGB3Q9Y5G1 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PCDHGB3Q9Y5G1 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.58■□□□□ 0.25
PCDHGB3Q9Y5G1 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
PCDHGB3Q9Y5G1 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHGB3Q9Y5G1 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHGB3Q9Y5G1 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHGB3Q9Y5G1 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHGB3Q9Y5G1 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC16.58■□□□□ 0.24
PCDHGB3Q9Y5G1 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHGB3Q9Y5G1 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.58■□□□□ 0.24
PCDHGB3Q9Y5G1 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHGB3Q9Y5G1 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.58■□□□□ 0.24
PCDHGB3Q9Y5G1 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.58■□□□□ 0.24
PCDHGB3Q9Y5G1 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.58■□□□□ 0.24
PCDHGB3Q9Y5G1 LINC01451-201ENST00000623792 534 ntBASIC16.58■□□□□ 0.24
PCDHGB3Q9Y5G1 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHGB3Q9Y5G1 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.58■□□□□ 0.24
PCDHGB3Q9Y5G1 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.58■□□□□ 0.24
PCDHGB3Q9Y5G1 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHGB3Q9Y5G1 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHGB3Q9Y5G1 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHGB3Q9Y5G1 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHGB3Q9Y5G1 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
PCDHGB3Q9Y5G1 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.58■□□□□ 0.24
PCDHGB3Q9Y5G1 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
PCDHGB3Q9Y5G1 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
PCDHGB3Q9Y5G1 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHGB3Q9Y5G1 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHGB3Q9Y5G1 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHGB3Q9Y5G1 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
PCDHGB3Q9Y5G1 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGB3Q9Y5G1 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGB3Q9Y5G1 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGB3Q9Y5G1 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.57■□□□□ 0.24
PCDHGB3Q9Y5G1 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
PCDHGB3Q9Y5G1 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
PCDHGB3Q9Y5G1 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGB3Q9Y5G1 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGB3Q9Y5G1 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
PCDHGB3Q9Y5G1 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGB3Q9Y5G1 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGB3Q9Y5G1 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGB3Q9Y5G1 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGB3Q9Y5G1 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGB3Q9Y5G1 AL450487.1-201ENST00000426799 995 ntBASIC16.57■□□□□ 0.24
PCDHGB3Q9Y5G1 CHCHD2P8-201ENST00000429873 447 ntBASIC16.57■□□□□ 0.24
PCDHGB3Q9Y5G1 MTCL1P1-201ENST00000446207 792 ntBASIC16.57■□□□□ 0.24
PCDHGB3Q9Y5G1 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
PCDHGB3Q9Y5G1 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC16.57■□□□□ 0.24
PCDHGB3Q9Y5G1 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms