Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHB13Q9Y5F0 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHB13Q9Y5F0 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHB13Q9Y5F0 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
PCDHB13Q9Y5F0 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC19.3■□□□□ 0.68
PCDHB13Q9Y5F0 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
PCDHB13Q9Y5F0 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.3■□□□□ 0.68
PCDHB13Q9Y5F0 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
PCDHB13Q9Y5F0 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHB13Q9Y5F0 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHB13Q9Y5F0 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHB13Q9Y5F0 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC19.29■□□□□ 0.68
PCDHB13Q9Y5F0 BOC-212ENST00000485230 2173 ntTSL 2 BASIC19.29■□□□□ 0.68
PCDHB13Q9Y5F0 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHB13Q9Y5F0 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHB13Q9Y5F0 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHB13Q9Y5F0 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHB13Q9Y5F0 PMPCAP1-201ENST00000508114 1576 ntBASIC19.29■□□□□ 0.68
PCDHB13Q9Y5F0 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHB13Q9Y5F0 IFNA1-201ENST00000276927 863 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
PCDHB13Q9Y5F0 SOD2-201ENST00000337404 991 ntTSL 2 BASIC19.29■□□□□ 0.68
PCDHB13Q9Y5F0 NKTR-203ENST00000442970 646 ntTSL 2 BASIC19.29■□□□□ 0.68
PCDHB13Q9Y5F0 ABCD1P5-201ENST00000445663 754 ntBASIC19.29■□□□□ 0.68
PCDHB13Q9Y5F0 KRT18P31-201ENST00000506277 1292 ntBASIC19.29■□□□□ 0.68
PCDHB13Q9Y5F0 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC19.29■□□□□ 0.68
PCDHB13Q9Y5F0 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC19.29■□□□□ 0.68
PCDHB13Q9Y5F0 AC091304.2-201ENST00000564639 760 ntBASIC19.29■□□□□ 0.68
PCDHB13Q9Y5F0 AL391001.1-201ENST00000602747 715 ntBASIC19.29■□□□□ 0.68
PCDHB13Q9Y5F0 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC19.29■□□□□ 0.68
PCDHB13Q9Y5F0 AP000867.4-201ENST00000641616 219 ntBASIC19.29■□□□□ 0.68
PCDHB13Q9Y5F0 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHB13Q9Y5F0 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHB13Q9Y5F0 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
PCDHB13Q9Y5F0 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC19.29■□□□□ 0.68
PCDHB13Q9Y5F0 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
PCDHB13Q9Y5F0 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
PCDHB13Q9Y5F0 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC19.29■□□□□ 0.68
PCDHB13Q9Y5F0 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHB13Q9Y5F0 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
PCDHB13Q9Y5F0 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
PCDHB13Q9Y5F0 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC19.29■□□□□ 0.68
PCDHB13Q9Y5F0 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB13Q9Y5F0 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
PCDHB13Q9Y5F0 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC19.28■□□□□ 0.68
PCDHB13Q9Y5F0 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB13Q9Y5F0 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC19.28■□□□□ 0.68
PCDHB13Q9Y5F0 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC19.28■□□□□ 0.68
PCDHB13Q9Y5F0 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
PCDHB13Q9Y5F0 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB13Q9Y5F0 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB13Q9Y5F0 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB13Q9Y5F0 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
PCDHB13Q9Y5F0 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB13Q9Y5F0 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB13Q9Y5F0 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB13Q9Y5F0 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB13Q9Y5F0 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
PCDHB13Q9Y5F0 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC19.28■□□□□ 0.68
PCDHB13Q9Y5F0 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB13Q9Y5F0 AC132008.2-207ENST00000454517 770 ntBASIC19.28■□□□□ 0.68
PCDHB13Q9Y5F0 TPM1-218ENST00000559281 851 ntTSL 5 BASIC19.28■□□□□ 0.68
PCDHB13Q9Y5F0 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC19.28■□□□□ 0.68
PCDHB13Q9Y5F0 CLEC4GP1-201ENST00000596555 870 ntBASIC19.28■□□□□ 0.68
PCDHB13Q9Y5F0 AC073592.5-201ENST00000624854 528 ntBASIC19.28■□□□□ 0.68
PCDHB13Q9Y5F0 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC19.28■□□□□ 0.68
PCDHB13Q9Y5F0 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB13Q9Y5F0 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC19.28■□□□□ 0.68
PCDHB13Q9Y5F0 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB13Q9Y5F0 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB13Q9Y5F0 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC19.28■□□□□ 0.68
PCDHB13Q9Y5F0 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB13Q9Y5F0 TPR-209ENST00000613151 2478 ntTSL 5 BASIC19.28■□□□□ 0.68
PCDHB13Q9Y5F0 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
PCDHB13Q9Y5F0 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
PCDHB13Q9Y5F0 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB13Q9Y5F0 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
PCDHB13Q9Y5F0 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PCDHB13Q9Y5F0 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHB13Q9Y5F0 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHB13Q9Y5F0 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC19.27■□□□□ 0.68
PCDHB13Q9Y5F0 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHB13Q9Y5F0 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC19.27■□□□□ 0.68
PCDHB13Q9Y5F0 AC016396.2-201ENST00000562575 1417 ntBASIC19.27■□□□□ 0.68
PCDHB13Q9Y5F0 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC19.27■□□□□ 0.68
PCDHB13Q9Y5F0 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC19.27■□□□□ 0.68
PCDHB13Q9Y5F0 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC19.27■□□□□ 0.68
PCDHB13Q9Y5F0 MED16-201ENST00000269814 1199 ntTSL 5 BASIC19.27■□□□□ 0.68
PCDHB13Q9Y5F0 AC003669.1-201ENST00000334569 611 ntBASIC19.27■□□□□ 0.68
PCDHB13Q9Y5F0 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC19.27■□□□□ 0.68
PCDHB13Q9Y5F0 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
PCDHB13Q9Y5F0 RBSN-204ENST00000449050 903 ntTSL 2 BASIC19.27■□□□□ 0.68
PCDHB13Q9Y5F0 STK19B-204ENST00000512515 211 ntBASIC19.27■□□□□ 0.68
PCDHB13Q9Y5F0 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC19.27■□□□□ 0.68
PCDHB13Q9Y5F0 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC19.27■□□□□ 0.68
PCDHB13Q9Y5F0 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC19.27■□□□□ 0.68
PCDHB13Q9Y5F0 TK1-204ENST00000590430 683 ntTSL 3 BASIC19.27■□□□□ 0.68
PCDHB13Q9Y5F0 AL133445.2-201ENST00000611191 527 ntBASIC19.27■□□□□ 0.68
PCDHB13Q9Y5F0 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHB13Q9Y5F0 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PCDHB13Q9Y5F0 AL645608.8-201ENST00000606034 2086 ntBASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms