Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPA1Q9UND3 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
NPIPA1Q9UND3 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPA1Q9UND3 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPA1Q9UND3 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPA1Q9UND3 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
NPIPA1Q9UND3 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
NPIPA1Q9UND3 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPA1Q9UND3 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NPIPA1Q9UND3 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
NPIPA1Q9UND3 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
NPIPA1Q9UND3 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NPIPA1Q9UND3 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
NPIPA1Q9UND3 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.11■□□□□ 0.17
NPIPA1Q9UND3 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NPIPA1Q9UND3 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
NPIPA1Q9UND3 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NPIPA1Q9UND3 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.11■□□□□ 0.17
NPIPA1Q9UND3 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
NPIPA1Q9UND3 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
NPIPA1Q9UND3 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
NPIPA1Q9UND3 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NPIPA1Q9UND3 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
NPIPA1Q9UND3 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NPIPA1Q9UND3 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
NPIPA1Q9UND3 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NPIPA1Q9UND3 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.11■□□□□ 0.17
NPIPA1Q9UND3 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.11■□□□□ 0.17
NPIPA1Q9UND3 CTNS-203ENST00000399306 803 ntTSL 3 BASIC16.11■□□□□ 0.17
NPIPA1Q9UND3 AC007967.3-201ENST00000434308 558 ntBASIC16.11■□□□□ 0.17
NPIPA1Q9UND3 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NPIPA1Q9UND3 AC092865.5-201ENST00000545435 363 ntBASIC16.11■□□□□ 0.17
NPIPA1Q9UND3 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.11■□□□□ 0.17
NPIPA1Q9UND3 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.11■□□□□ 0.17
NPIPA1Q9UND3 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.11■□□□□ 0.17
NPIPA1Q9UND3 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NPIPA1Q9UND3 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NPIPA1Q9UND3 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
NPIPA1Q9UND3 HLA-J-201ENST00000462773 1622 ntBASIC16.11■□□□□ 0.17
NPIPA1Q9UND3 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
NPIPA1Q9UND3 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
NPIPA1Q9UND3 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NPIPA1Q9UND3 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
NPIPA1Q9UND3 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NPIPA1Q9UND3 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
NPIPA1Q9UND3 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
NPIPA1Q9UND3 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
NPIPA1Q9UND3 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.11■□□□□ 0.17
NPIPA1Q9UND3 AC026471.1-201ENST00000564629 3026 ntBASIC16.11■□□□□ 0.17
NPIPA1Q9UND3 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NPIPA1Q9UND3 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NPIPA1Q9UND3 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NPIPA1Q9UND3 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.1■□□□□ 0.17
NPIPA1Q9UND3 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.1■□□□□ 0.17
NPIPA1Q9UND3 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NPIPA1Q9UND3 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NPIPA1Q9UND3 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NPIPA1Q9UND3 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
NPIPA1Q9UND3 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
NPIPA1Q9UND3 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
NPIPA1Q9UND3 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
NPIPA1Q9UND3 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NPIPA1Q9UND3 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.1■□□□□ 0.17
NPIPA1Q9UND3 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.1■□□□□ 0.17
NPIPA1Q9UND3 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.1■□□□□ 0.17
NPIPA1Q9UND3 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC16.1■□□□□ 0.17
NPIPA1Q9UND3 AC092910.1-201ENST00000482027 1129 ntBASIC16.1■□□□□ 0.17
NPIPA1Q9UND3 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.1■□□□□ 0.17
NPIPA1Q9UND3 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.1■□□□□ 0.17
NPIPA1Q9UND3 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.1■□□□□ 0.17
NPIPA1Q9UND3 NKAPP1-205ENST00000585790 367 ntBASIC16.1■□□□□ 0.17
NPIPA1Q9UND3 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.1■□□□□ 0.17
NPIPA1Q9UND3 AL139288.1-201ENST00000623748 933 ntBASIC16.1■□□□□ 0.17
NPIPA1Q9UND3 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.1■□□□□ 0.17
NPIPA1Q9UND3 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.1■□□□□ 0.17
NPIPA1Q9UND3 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
NPIPA1Q9UND3 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NPIPA1Q9UND3 PMS2P7-201ENST00000506558 1336 ntBASIC16.1■□□□□ 0.17
NPIPA1Q9UND3 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
NPIPA1Q9UND3 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.1■□□□□ 0.17
NPIPA1Q9UND3 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.1■□□□□ 0.17
NPIPA1Q9UND3 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NPIPA1Q9UND3 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NPIPA1Q9UND3 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NPIPA1Q9UND3 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
NPIPA1Q9UND3 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
NPIPA1Q9UND3 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
NPIPA1Q9UND3 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NPIPA1Q9UND3 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NPIPA1Q9UND3 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
NPIPA1Q9UND3 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NPIPA1Q9UND3 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
NPIPA1Q9UND3 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
NPIPA1Q9UND3 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.09■□□□□ 0.17
NPIPA1Q9UND3 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NPIPA1Q9UND3 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
NPIPA1Q9UND3 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
NPIPA1Q9UND3 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
NPIPA1Q9UND3 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.09■□□□□ 0.17
NPIPA1Q9UND3 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms