Protein–RNA interactions for Protein: Q9UK58

CCNL1, Cyclin-L1, humanhuman

Predicted RBP Predictions only

Length 526 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1Q9UK58 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CCNL1Q9UK58 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CCNL1Q9UK58 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC21.98■■□□□ 1.11
CCNL1Q9UK58 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC21.98■■□□□ 1.11
CCNL1Q9UK58 AC092580.3-201ENST00000430932 139 ntBASIC21.98■■□□□ 1.11
CCNL1Q9UK58 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CCNL1Q9UK58 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC21.98■■□□□ 1.11
CCNL1Q9UK58 GATD1-206ENST00000526325 756 ntTSL 5 BASIC21.98■■□□□ 1.11
CCNL1Q9UK58 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC21.98■■□□□ 1.11
CCNL1Q9UK58 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC21.98■■□□□ 1.11
CCNL1Q9UK58 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC21.98■■□□□ 1.11
CCNL1Q9UK58 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC21.98■■□□□ 1.11
CCNL1Q9UK58 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
CCNL1Q9UK58 AC120498.9-201ENST00000339021 3867 ntBASIC21.98■■□□□ 1.11
CCNL1Q9UK58 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
CCNL1Q9UK58 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CCNL1Q9UK58 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC21.98■■□□□ 1.11
CCNL1Q9UK58 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC21.98■■□□□ 1.11
CCNL1Q9UK58 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
CCNL1Q9UK58 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
CCNL1Q9UK58 AC135776.1-201ENST00000319817 2481 ntBASIC21.97■■□□□ 1.11
CCNL1Q9UK58 GNAS-203ENST00000306120 1878 ntBASIC21.97■■□□□ 1.11
CCNL1Q9UK58 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
CCNL1Q9UK58 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC21.97■■□□□ 1.11
CCNL1Q9UK58 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC21.97■■□□□ 1.11
CCNL1Q9UK58 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC21.97■■□□□ 1.11
CCNL1Q9UK58 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC21.97■■□□□ 1.11
CCNL1Q9UK58 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC21.97■■□□□ 1.11
CCNL1Q9UK58 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC21.97■■□□□ 1.11
CCNL1Q9UK58 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CCNL1Q9UK58 COQ6-210ENST00000554920 649 ntTSL 3 BASIC21.97■■□□□ 1.11
CCNL1Q9UK58 AC025048.6-201ENST00000634326 1161 ntBASIC21.97■■□□□ 1.11
CCNL1Q9UK58 AC073130.3-201ENST00000624389 2278 ntBASIC21.97■■□□□ 1.11
CCNL1Q9UK58 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CCNL1Q9UK58 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
CCNL1Q9UK58 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC21.97■■□□□ 1.11
CCNL1Q9UK58 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CCNL1Q9UK58 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC21.97■■□□□ 1.11
CCNL1Q9UK58 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCNL1Q9UK58 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC21.96■■□□□ 1.11
CCNL1Q9UK58 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
CCNL1Q9UK58 CROCCP3-202ENST00000420820 1947 ntBASIC21.96■■□□□ 1.11
CCNL1Q9UK58 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC21.96■■□□□ 1.11
CCNL1Q9UK58 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCNL1Q9UK58 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
CCNL1Q9UK58 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CCNL1Q9UK58 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCNL1Q9UK58 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC21.96■■□□□ 1.11
CCNL1Q9UK58 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC21.96■■□□□ 1.11
CCNL1Q9UK58 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC21.96■■□□□ 1.11
CCNL1Q9UK58 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC21.96■■□□□ 1.11
CCNL1Q9UK58 AL359881.2-201ENST00000602973 570 ntBASIC21.96■■□□□ 1.11
CCNL1Q9UK58 AL009183.1-201ENST00000603760 355 ntBASIC21.96■■□□□ 1.11
CCNL1Q9UK58 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC21.96■■□□□ 1.11
CCNL1Q9UK58 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC21.96■■□□□ 1.11
CCNL1Q9UK58 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCNL1Q9UK58 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCNL1Q9UK58 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CCNL1Q9UK58 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCNL1Q9UK58 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC21.96■■□□□ 1.11
CCNL1Q9UK58 TDG-209ENST00000544861 1387 ntTSL 2 BASIC21.96■■□□□ 1.11
CCNL1Q9UK58 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCNL1Q9UK58 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CCNL1Q9UK58 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC21.96■■□□□ 1.11
CCNL1Q9UK58 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC21.96■■□□□ 1.11
CCNL1Q9UK58 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
CCNL1Q9UK58 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC21.96■■□□□ 1.11
CCNL1Q9UK58 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC21.96■■□□□ 1.11
CCNL1Q9UK58 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC21.96■■□□□ 1.11
CCNL1Q9UK58 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.11
CCNL1Q9UK58 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC21.95■■□□□ 1.11
CCNL1Q9UK58 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CCNL1Q9UK58 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCNL1Q9UK58 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCNL1Q9UK58 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCNL1Q9UK58 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC21.95■■□□□ 1.1
CCNL1Q9UK58 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCNL1Q9UK58 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCNL1Q9UK58 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
CCNL1Q9UK58 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCNL1Q9UK58 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
CCNL1Q9UK58 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
CCNL1Q9UK58 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCNL1Q9UK58 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC21.95■■□□□ 1.1
CCNL1Q9UK58 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC21.95■■□□□ 1.1
CCNL1Q9UK58 HLA-V-201ENST00000429037 534 ntBASIC21.95■■□□□ 1.1
CCNL1Q9UK58 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC21.95■■□□□ 1.1
CCNL1Q9UK58 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
CCNL1Q9UK58 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CCNL1Q9UK58 SPDYE22P-201ENST00000582158 798 ntBASIC21.95■■□□□ 1.1
CCNL1Q9UK58 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCNL1Q9UK58 AL662799.1-202ENST00000614205 422 ntBASIC21.95■■□□□ 1.1
CCNL1Q9UK58 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCNL1Q9UK58 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC21.95■■□□□ 1.1
CCNL1Q9UK58 AP000997.3-201ENST00000623333 2250 ntBASIC21.95■■□□□ 1.1
CCNL1Q9UK58 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC21.95■■□□□ 1.1
CCNL1Q9UK58 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
CCNL1Q9UK58 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC21.94■■□□□ 1.1
CCNL1Q9UK58 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
CCNL1Q9UK58 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms