Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NPAS2Q99743 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.1■□□□□ 0.33
NPAS2Q99743 AL139384.1-201ENST00000612143 3047 ntBASIC17.1■□□□□ 0.33
NPAS2Q99743 AC022898.2-201ENST00000616822 1312 ntBASIC17.1■□□□□ 0.33
NPAS2Q99743 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NPAS2Q99743 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NPAS2Q99743 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NPAS2Q99743 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NPAS2Q99743 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.1■□□□□ 0.33
NPAS2Q99743 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NPAS2Q99743 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NPAS2Q99743 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
NPAS2Q99743 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NPAS2Q99743 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NPAS2Q99743 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NPAS2Q99743 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.1■□□□□ 0.33
NPAS2Q99743 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.1■□□□□ 0.33
NPAS2Q99743 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NPAS2Q99743 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NPAS2Q99743 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
NPAS2Q99743 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NPAS2Q99743 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NPAS2Q99743 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NPAS2Q99743 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.09■□□□□ 0.33
NPAS2Q99743 MIR662-201ENST00000384847 95 ntBASIC17.09■□□□□ 0.33
NPAS2Q99743 KRT18P56-201ENST00000507275 550 ntBASIC17.09■□□□□ 0.33
NPAS2Q99743 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.09■□□□□ 0.33
NPAS2Q99743 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.09■□□□□ 0.33
NPAS2Q99743 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
NPAS2Q99743 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NPAS2Q99743 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NPAS2Q99743 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.09■□□□□ 0.33
NPAS2Q99743 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NPAS2Q99743 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.09■□□□□ 0.33
NPAS2Q99743 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
NPAS2Q99743 AC060834.1-201ENST00000443027 2032 ntBASIC17.09■□□□□ 0.33
NPAS2Q99743 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
NPAS2Q99743 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.09■□□□□ 0.33
NPAS2Q99743 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NPAS2Q99743 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
NPAS2Q99743 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
NPAS2Q99743 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NPAS2Q99743 CROCCP1-201ENST00000426910 5675 ntBASIC17.08■□□□□ 0.33
NPAS2Q99743 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
NPAS2Q99743 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NPAS2Q99743 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.08■□□□□ 0.33
NPAS2Q99743 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NPAS2Q99743 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
NPAS2Q99743 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
NPAS2Q99743 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
NPAS2Q99743 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.33
NPAS2Q99743 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.08■□□□□ 0.33
NPAS2Q99743 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NPAS2Q99743 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
NPAS2Q99743 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.08■□□□□ 0.32
NPAS2Q99743 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NPAS2Q99743 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
NPAS2Q99743 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NPAS2Q99743 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NPAS2Q99743 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NPAS2Q99743 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.08■□□□□ 0.32
NPAS2Q99743 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
NPAS2Q99743 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
NPAS2Q99743 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.08■□□□□ 0.32
NPAS2Q99743 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.08■□□□□ 0.32
NPAS2Q99743 NPAP1P7-201ENST00000613027 823 ntBASIC17.08■□□□□ 0.32
NPAS2Q99743 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.08■□□□□ 0.32
NPAS2Q99743 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
NPAS2Q99743 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.08■□□□□ 0.32
NPAS2Q99743 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
NPAS2Q99743 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
NPAS2Q99743 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NPAS2Q99743 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NPAS2Q99743 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
NPAS2Q99743 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.08■□□□□ 0.32
NPAS2Q99743 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.08■□□□□ 0.32
NPAS2Q99743 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NPAS2Q99743 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
NPAS2Q99743 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.07■□□□□ 0.32
NPAS2Q99743 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NPAS2Q99743 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.07■□□□□ 0.32
NPAS2Q99743 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NPAS2Q99743 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NPAS2Q99743 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
NPAS2Q99743 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
NPAS2Q99743 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
NPAS2Q99743 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.07■□□□□ 0.32
NPAS2Q99743 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC17.07■□□□□ 0.32
NPAS2Q99743 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
NPAS2Q99743 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NPAS2Q99743 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
NPAS2Q99743 OR6D1P-203ENST00000641209 4860 ntBASIC17.07■□□□□ 0.32
NPAS2Q99743 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.07■□□□□ 0.32
NPAS2Q99743 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.07■□□□□ 0.32
NPAS2Q99743 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
NPAS2Q99743 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
NPAS2Q99743 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.07■□□□□ 0.32
NPAS2Q99743 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.07■□□□□ 0.32
NPAS2Q99743 RNF126P1-202ENST00000569893 925 ntBASIC17.07■□□□□ 0.32
NPAS2Q99743 MIR3180-4-201ENST00000582223 153 ntBASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms