Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
S1PR3Q99500 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
S1PR3Q99500 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC14.43□□□□□ -0.1
S1PR3Q99500 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
S1PR3Q99500 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
S1PR3Q99500 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
S1PR3Q99500 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
S1PR3Q99500 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
S1PR3Q99500 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
S1PR3Q99500 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
S1PR3Q99500 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
S1PR3Q99500 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
S1PR3Q99500 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
S1PR3Q99500 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
S1PR3Q99500 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
S1PR3Q99500 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
S1PR3Q99500 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
S1PR3Q99500 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
S1PR3Q99500 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
S1PR3Q99500 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
S1PR3Q99500 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC14.43□□□□□ -0.1
S1PR3Q99500 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC14.43□□□□□ -0.1
S1PR3Q99500 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
S1PR3Q99500 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
S1PR3Q99500 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
S1PR3Q99500 AC097374.2-201ENST00000618617 1306 ntBASIC14.42□□□□□ -0.1
S1PR3Q99500 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC14.42□□□□□ -0.1
S1PR3Q99500 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
S1PR3Q99500 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC14.42□□□□□ -0.1
S1PR3Q99500 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
S1PR3Q99500 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
S1PR3Q99500 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
S1PR3Q99500 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
S1PR3Q99500 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC14.42□□□□□ -0.1
S1PR3Q99500 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
S1PR3Q99500 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
S1PR3Q99500 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
S1PR3Q99500 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
S1PR3Q99500 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC14.42□□□□□ -0.1
S1PR3Q99500 AC096633.1-201ENST00000422446 749 ntBASIC14.42□□□□□ -0.1
S1PR3Q99500 TSPY22P-201ENST00000427496 604 ntBASIC14.42□□□□□ -0.1
S1PR3Q99500 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC14.42□□□□□ -0.1
S1PR3Q99500 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC14.42□□□□□ -0.1
S1PR3Q99500 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
S1PR3Q99500 PTK2-216ENST00000519881 863 ntTSL 3 BASIC14.42□□□□□ -0.1
S1PR3Q99500 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC14.42□□□□□ -0.1
S1PR3Q99500 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC14.42□□□□□ -0.1
S1PR3Q99500 TPM1-226ENST00000560959 925 ntTSL 2 BASIC14.42□□□□□ -0.1
S1PR3Q99500 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
S1PR3Q99500 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
S1PR3Q99500 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
S1PR3Q99500 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC14.42□□□□□ -0.1
S1PR3Q99500 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
S1PR3Q99500 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
S1PR3Q99500 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC14.42□□□□□ -0.1
S1PR3Q99500 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
S1PR3Q99500 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC14.42□□□□□ -0.1
S1PR3Q99500 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.42□□□□□ -0.1
S1PR3Q99500 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
S1PR3Q99500 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
S1PR3Q99500 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
S1PR3Q99500 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC14.41□□□□□ -0.1
S1PR3Q99500 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
S1PR3Q99500 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC14.41□□□□□ -0.1
S1PR3Q99500 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC14.41□□□□□ -0.1
S1PR3Q99500 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
S1PR3Q99500 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC14.41□□□□□ -0.1
S1PR3Q99500 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
S1PR3Q99500 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC14.41□□□□□ -0.1
S1PR3Q99500 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
S1PR3Q99500 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
S1PR3Q99500 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
S1PR3Q99500 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
S1PR3Q99500 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
S1PR3Q99500 FXN-203ENST00000396366 922 ntTSL 2 BASIC14.41□□□□□ -0.1
S1PR3Q99500 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
S1PR3Q99500 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC14.41□□□□□ -0.1
S1PR3Q99500 CNP-204ENST00000472031 1019 ntTSL 2 BASIC14.41□□□□□ -0.1
S1PR3Q99500 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC14.41□□□□□ -0.1
S1PR3Q99500 AC090616.6-201ENST00000582640 721 ntBASIC14.41□□□□□ -0.1
S1PR3Q99500 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC14.41□□□□□ -0.1
S1PR3Q99500 AC116407.4-201ENST00000623319 1061 ntBASIC14.41□□□□□ -0.1
S1PR3Q99500 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
S1PR3Q99500 IER3-202ENST00000376377 1350 ntBASIC14.41□□□□□ -0.1
S1PR3Q99500 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
S1PR3Q99500 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
S1PR3Q99500 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
S1PR3Q99500 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
S1PR3Q99500 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
S1PR3Q99500 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
S1PR3Q99500 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
S1PR3Q99500 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.41□□□□□ -0.1
S1PR3Q99500 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
S1PR3Q99500 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
S1PR3Q99500 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
S1PR3Q99500 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC14.41□□□□□ -0.1
S1PR3Q99500 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
S1PR3Q99500 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
S1PR3Q99500 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
S1PR3Q99500 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms