Protein–RNA interactions for Protein: Q96NY8

NECTIN4, Nectin-4, humanhuman

Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4Q96NY8 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NECTIN4Q96NY8 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.96■□□□□ 0.47
NECTIN4Q96NY8 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.96■□□□□ 0.47
NECTIN4Q96NY8 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC17.96■□□□□ 0.47
NECTIN4Q96NY8 KRT8P48-201ENST00000515599 1220 ntBASIC17.96■□□□□ 0.47
NECTIN4Q96NY8 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC17.96■□□□□ 0.47
NECTIN4Q96NY8 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.96■□□□□ 0.47
NECTIN4Q96NY8 NAA60-208ENST00000570819 833 ntTSL 2 BASIC17.96■□□□□ 0.47
NECTIN4Q96NY8 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC17.96■□□□□ 0.47
NECTIN4Q96NY8 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.96■□□□□ 0.47
NECTIN4Q96NY8 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
NECTIN4Q96NY8 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
NECTIN4Q96NY8 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
NECTIN4Q96NY8 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.96■□□□□ 0.47
NECTIN4Q96NY8 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NECTIN4Q96NY8 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
NECTIN4Q96NY8 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.47
NECTIN4Q96NY8 TUBB3P1-201ENST00000405796 1332 ntBASIC17.96■□□□□ 0.46
NECTIN4Q96NY8 AC004408.2-201ENST00000623613 2777 ntBASIC17.96■□□□□ 0.46
NECTIN4Q96NY8 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.46
NECTIN4Q96NY8 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.96■□□□□ 0.46
NECTIN4Q96NY8 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NECTIN4Q96NY8 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.95■□□□□ 0.46
NECTIN4Q96NY8 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NECTIN4Q96NY8 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NECTIN4Q96NY8 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.95■□□□□ 0.46
NECTIN4Q96NY8 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NECTIN4Q96NY8 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NECTIN4Q96NY8 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC17.95■□□□□ 0.46
NECTIN4Q96NY8 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NECTIN4Q96NY8 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NECTIN4Q96NY8 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.95■□□□□ 0.46
NECTIN4Q96NY8 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NECTIN4Q96NY8 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NECTIN4Q96NY8 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NECTIN4Q96NY8 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17.95■□□□□ 0.46
NECTIN4Q96NY8 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NECTIN4Q96NY8 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NECTIN4Q96NY8 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.95■□□□□ 0.46
NECTIN4Q96NY8 HNRNPA1P40-201ENST00000426371 1278 ntBASIC17.95■□□□□ 0.46
NECTIN4Q96NY8 KLF2P3-201ENST00000451977 1087 ntBASIC17.95■□□□□ 0.46
NECTIN4Q96NY8 OARD1-208ENST00000469104 704 ntTSL 2 BASIC17.95■□□□□ 0.46
NECTIN4Q96NY8 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.95■□□□□ 0.46
NECTIN4Q96NY8 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NECTIN4Q96NY8 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
NECTIN4Q96NY8 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC17.95■□□□□ 0.46
NECTIN4Q96NY8 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC17.95■□□□□ 0.46
NECTIN4Q96NY8 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.95■□□□□ 0.46
NECTIN4Q96NY8 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NECTIN4Q96NY8 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
NECTIN4Q96NY8 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NECTIN4Q96NY8 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.95■□□□□ 0.46
NECTIN4Q96NY8 AKAP8P1-201ENST00000434743 1349 ntBASIC17.95■□□□□ 0.46
NECTIN4Q96NY8 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
NECTIN4Q96NY8 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
NECTIN4Q96NY8 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
NECTIN4Q96NY8 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NECTIN4Q96NY8 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.94■□□□□ 0.46
NECTIN4Q96NY8 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.94■□□□□ 0.46
NECTIN4Q96NY8 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
NECTIN4Q96NY8 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
NECTIN4Q96NY8 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.94■□□□□ 0.46
NECTIN4Q96NY8 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NECTIN4Q96NY8 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NECTIN4Q96NY8 MIR943-201ENST00000401286 94 ntBASIC17.94■□□□□ 0.46
NECTIN4Q96NY8 TFAMP1-201ENST00000412727 736 ntBASIC17.94■□□□□ 0.46
NECTIN4Q96NY8 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.94■□□□□ 0.46
NECTIN4Q96NY8 AC002472.2-201ENST00000442739 958 ntBASIC17.94■□□□□ 0.46
NECTIN4Q96NY8 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC17.94■□□□□ 0.46
NECTIN4Q96NY8 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
NECTIN4Q96NY8 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC17.94■□□□□ 0.46
NECTIN4Q96NY8 AC079140.1-201ENST00000508039 487 ntBASIC17.94■□□□□ 0.46
NECTIN4Q96NY8 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17.94■□□□□ 0.46
NECTIN4Q96NY8 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17.94■□□□□ 0.46
NECTIN4Q96NY8 AC005225.4-201ENST00000557330 545 ntBASIC17.94■□□□□ 0.46
NECTIN4Q96NY8 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NECTIN4Q96NY8 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC17.94■□□□□ 0.46
NECTIN4Q96NY8 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NECTIN4Q96NY8 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC17.94■□□□□ 0.46
NECTIN4Q96NY8 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC17.94■□□□□ 0.46
NECTIN4Q96NY8 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NECTIN4Q96NY8 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NECTIN4Q96NY8 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NECTIN4Q96NY8 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
NECTIN4Q96NY8 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NECTIN4Q96NY8 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NECTIN4Q96NY8 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
NECTIN4Q96NY8 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.94■□□□□ 0.46
NECTIN4Q96NY8 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.94■□□□□ 0.46
NECTIN4Q96NY8 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
NECTIN4Q96NY8 CYP51A1P2-201ENST00000419457 1499 ntBASIC17.94■□□□□ 0.46
NECTIN4Q96NY8 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NECTIN4Q96NY8 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
NECTIN4Q96NY8 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NECTIN4Q96NY8 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
NECTIN4Q96NY8 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.94■□□□□ 0.46
NECTIN4Q96NY8 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NECTIN4Q96NY8 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NECTIN4Q96NY8 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NECTIN4Q96NY8 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms