Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 AC007613.1-201ENST00000572811 2597 ntBASIC18.77■□□□□ 0.6
SNX27Q96L92 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SNX27Q96L92 RPS15P9-201ENST00000494093 319 ntBASIC18.77■□□□□ 0.6
SNX27Q96L92 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC18.77■□□□□ 0.6
SNX27Q96L92 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.77■□□□□ 0.6
SNX27Q96L92 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.77■□□□□ 0.6
SNX27Q96L92 AC011467.4-201ENST00000594891 528 ntBASIC18.77■□□□□ 0.6
SNX27Q96L92 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
SNX27Q96L92 AL805961.1-202ENST00000641562 540 ntBASIC18.77■□□□□ 0.6
SNX27Q96L92 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
SNX27Q96L92 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.77■□□□□ 0.6
SNX27Q96L92 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SNX27Q96L92 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
SNX27Q96L92 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.77■□□□□ 0.6
SNX27Q96L92 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC18.77■□□□□ 0.6
SNX27Q96L92 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SNX27Q96L92 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
SNX27Q96L92 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.59
SNX27Q96L92 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.59
SNX27Q96L92 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNX27Q96L92 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
SNX27Q96L92 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNX27Q96L92 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SNX27Q96L92 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SNX27Q96L92 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNX27Q96L92 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
SNX27Q96L92 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNX27Q96L92 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
SNX27Q96L92 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNX27Q96L92 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNX27Q96L92 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC18.76■□□□□ 0.59
SNX27Q96L92 AC108751.1-201ENST00000490852 363 ntBASIC18.76■□□□□ 0.59
SNX27Q96L92 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SNX27Q96L92 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC18.76■□□□□ 0.59
SNX27Q96L92 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SNX27Q96L92 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.76■□□□□ 0.59
SNX27Q96L92 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC18.76■□□□□ 0.59
SNX27Q96L92 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
SNX27Q96L92 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC18.76■□□□□ 0.59
SNX27Q96L92 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
SNX27Q96L92 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNX27Q96L92 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.76■□□□□ 0.59
SNX27Q96L92 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.76■□□□□ 0.59
SNX27Q96L92 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
SNX27Q96L92 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.76■□□□□ 0.59
SNX27Q96L92 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SNX27Q96L92 AC134043.2-201ENST00000624206 2238 ntBASIC18.76■□□□□ 0.59
SNX27Q96L92 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.76■□□□□ 0.59
SNX27Q96L92 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
SNX27Q96L92 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNX27Q96L92 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNX27Q96L92 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNX27Q96L92 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNX27Q96L92 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNX27Q96L92 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.75■□□□□ 0.59
SNX27Q96L92 RPSAP43-201ENST00000402237 625 ntBASIC18.75■□□□□ 0.59
SNX27Q96L92 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SNX27Q96L92 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNX27Q96L92 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
SNX27Q96L92 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNX27Q96L92 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.75■□□□□ 0.59
SNX27Q96L92 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC18.75■□□□□ 0.59
SNX27Q96L92 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNX27Q96L92 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SNX27Q96L92 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
SNX27Q96L92 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNX27Q96L92 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SNX27Q96L92 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SNX27Q96L92 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SNX27Q96L92 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNX27Q96L92 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
SNX27Q96L92 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.75■□□□□ 0.59
SNX27Q96L92 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
SNX27Q96L92 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SNX27Q96L92 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.75■□□□□ 0.59
SNX27Q96L92 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SNX27Q96L92 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
SNX27Q96L92 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
SNX27Q96L92 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC18.74■□□□□ 0.59
SNX27Q96L92 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SNX27Q96L92 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SNX27Q96L92 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC18.74■□□□□ 0.59
SNX27Q96L92 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.74■□□□□ 0.59
SNX27Q96L92 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SNX27Q96L92 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SNX27Q96L92 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SNX27Q96L92 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SNX27Q96L92 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.74■□□□□ 0.59
SNX27Q96L92 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SNX27Q96L92 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
SNX27Q96L92 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC18.74■□□□□ 0.59
SNX27Q96L92 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SNX27Q96L92 GPX1P2-201ENST00000429271 606 ntBASIC18.74■□□□□ 0.59
SNX27Q96L92 IGHV3-65-201ENST00000523210 341 ntBASIC18.74■□□□□ 0.59
SNX27Q96L92 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC18.74■□□□□ 0.59
SNX27Q96L92 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.74■□□□□ 0.59
SNX27Q96L92 AC008667.4-201ENST00000607370 168 ntBASIC18.74■□□□□ 0.59
SNX27Q96L92 AC027601.4-201ENST00000611259 610 ntBASIC18.74■□□□□ 0.59
SNX27Q96L92 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.74■□□□□ 0.59
SNX27Q96L92 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms