Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 SPDYE22P-201ENST00000582158 798 ntBASIC20.22■□□□□ 0.83
CDCA5Q96FF9 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC20.22■□□□□ 0.83
CDCA5Q96FF9 AL359881.2-201ENST00000602973 570 ntBASIC20.22■□□□□ 0.83
CDCA5Q96FF9 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC20.22■□□□□ 0.83
CDCA5Q96FF9 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC20.22■□□□□ 0.83
CDCA5Q96FF9 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDCA5Q96FF9 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDCA5Q96FF9 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDCA5Q96FF9 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC20.22■□□□□ 0.83
CDCA5Q96FF9 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDCA5Q96FF9 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDCA5Q96FF9 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CDCA5Q96FF9 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC20.21■□□□□ 0.83
CDCA5Q96FF9 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDCA5Q96FF9 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDCA5Q96FF9 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC20.21■□□□□ 0.83
CDCA5Q96FF9 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDCA5Q96FF9 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CDCA5Q96FF9 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC20.21■□□□□ 0.83
CDCA5Q96FF9 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC20.21■□□□□ 0.83
CDCA5Q96FF9 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC20.21■□□□□ 0.83
CDCA5Q96FF9 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CDCA5Q96FF9 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC20.21■□□□□ 0.83
CDCA5Q96FF9 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC20.21■□□□□ 0.83
CDCA5Q96FF9 AL596325.1-201ENST00000563991 1082 ntBASIC20.21■□□□□ 0.83
CDCA5Q96FF9 AL009183.1-201ENST00000603760 355 ntBASIC20.21■□□□□ 0.83
CDCA5Q96FF9 AL662799.1-202ENST00000614205 422 ntBASIC20.21■□□□□ 0.83
CDCA5Q96FF9 AC073130.3-201ENST00000624389 2278 ntBASIC20.21■□□□□ 0.83
CDCA5Q96FF9 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CDCA5Q96FF9 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDCA5Q96FF9 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC20.21■□□□□ 0.83
CDCA5Q96FF9 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
CDCA5Q96FF9 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDCA5Q96FF9 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CDCA5Q96FF9 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.21■□□□□ 0.83
CDCA5Q96FF9 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC20.21■□□□□ 0.83
CDCA5Q96FF9 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
CDCA5Q96FF9 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC20.2■□□□□ 0.83
CDCA5Q96FF9 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDCA5Q96FF9 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CDCA5Q96FF9 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CDCA5Q96FF9 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDCA5Q96FF9 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CDCA5Q96FF9 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDCA5Q96FF9 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDCA5Q96FF9 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CDCA5Q96FF9 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC20.2■□□□□ 0.82
CDCA5Q96FF9 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDCA5Q96FF9 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC20.2■□□□□ 0.82
CDCA5Q96FF9 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC20.2■□□□□ 0.82
CDCA5Q96FF9 MRPS18AP1-201ENST00000414458 589 ntBASIC20.2■□□□□ 0.82
CDCA5Q96FF9 NME2P1-201ENST00000426182 414 ntBASIC20.2■□□□□ 0.82
CDCA5Q96FF9 AC004890.2-204ENST00000481968 304 ntBASIC20.2■□□□□ 0.82
CDCA5Q96FF9 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC20.2■□□□□ 0.82
CDCA5Q96FF9 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CDCA5Q96FF9 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC20.2■□□□□ 0.82
CDCA5Q96FF9 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CDCA5Q96FF9 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC20.2■□□□□ 0.82
CDCA5Q96FF9 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC20.2■□□□□ 0.82
CDCA5Q96FF9 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC20.2■□□□□ 0.82
CDCA5Q96FF9 COQ9-214ENST00000567933 882 ntTSL 3 BASIC20.2■□□□□ 0.82
CDCA5Q96FF9 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDCA5Q96FF9 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDCA5Q96FF9 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC20.2■□□□□ 0.82
CDCA5Q96FF9 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC20.2■□□□□ 0.82
CDCA5Q96FF9 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDCA5Q96FF9 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDCA5Q96FF9 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDCA5Q96FF9 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDCA5Q96FF9 CROCCP3-202ENST00000420820 1947 ntBASIC20.19■□□□□ 0.82
CDCA5Q96FF9 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC20.19■□□□□ 0.82
CDCA5Q96FF9 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
CDCA5Q96FF9 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CDCA5Q96FF9 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDCA5Q96FF9 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDCA5Q96FF9 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CDCA5Q96FF9 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDCA5Q96FF9 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDCA5Q96FF9 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC20.19■□□□□ 0.82
CDCA5Q96FF9 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDCA5Q96FF9 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDCA5Q96FF9 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
CDCA5Q96FF9 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CDCA5Q96FF9 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CDCA5Q96FF9 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
CDCA5Q96FF9 RN7SL692P-201ENST00000464677 288 ntBASIC20.19■□□□□ 0.82
CDCA5Q96FF9 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CDCA5Q96FF9 ALG1L8P-201ENST00000533887 760 ntBASIC20.19■□□□□ 0.82
CDCA5Q96FF9 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC20.19■□□□□ 0.82
CDCA5Q96FF9 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CDCA5Q96FF9 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CDCA5Q96FF9 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC20.19■□□□□ 0.82
CDCA5Q96FF9 AC135776.1-201ENST00000319817 2481 ntBASIC20.19■□□□□ 0.82
CDCA5Q96FF9 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CDCA5Q96FF9 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CDCA5Q96FF9 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC20.19■□□□□ 0.82
CDCA5Q96FF9 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDCA5Q96FF9 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
CDCA5Q96FF9 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC20.19■□□□□ 0.82
CDCA5Q96FF9 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms