Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SNRNP40Q96DI7 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SNRNP40Q96DI7 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SNRNP40Q96DI7 WBP2-203ENST00000433525 928 ntTSL 2 BASIC15.61■□□□□ 0.09
SNRNP40Q96DI7 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
SNRNP40Q96DI7 GATB-205ENST00000508611 605 ntTSL 2 BASIC15.61■□□□□ 0.09
SNRNP40Q96DI7 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.61■□□□□ 0.09
SNRNP40Q96DI7 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SNRNP40Q96DI7 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC15.61■□□□□ 0.09
SNRNP40Q96DI7 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.61■□□□□ 0.09
SNRNP40Q96DI7 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.61■□□□□ 0.09
SNRNP40Q96DI7 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.61■□□□□ 0.09
SNRNP40Q96DI7 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SNRNP40Q96DI7 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SNRNP40Q96DI7 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
SNRNP40Q96DI7 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC15.61■□□□□ 0.09
SNRNP40Q96DI7 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SNRNP40Q96DI7 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SNRNP40Q96DI7 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC15.61■□□□□ 0.09
SNRNP40Q96DI7 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
SNRNP40Q96DI7 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC15.61■□□□□ 0.09
SNRNP40Q96DI7 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SNRNP40Q96DI7 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
SNRNP40Q96DI7 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SNRNP40Q96DI7 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SNRNP40Q96DI7 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SNRNP40Q96DI7 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
SNRNP40Q96DI7 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SNRNP40Q96DI7 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
SNRNP40Q96DI7 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SNRNP40Q96DI7 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
SNRNP40Q96DI7 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
SNRNP40Q96DI7 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
SNRNP40Q96DI7 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC15.6■□□□□ 0.09
SNRNP40Q96DI7 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SNRNP40Q96DI7 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
SNRNP40Q96DI7 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
SNRNP40Q96DI7 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.6■□□□□ 0.09
SNRNP40Q96DI7 TIMM8BP1-201ENST00000452384 211 ntBASIC15.6■□□□□ 0.09
SNRNP40Q96DI7 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SNRNP40Q96DI7 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
SNRNP40Q96DI7 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.6■□□□□ 0.09
SNRNP40Q96DI7 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC15.6■□□□□ 0.09
SNRNP40Q96DI7 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC15.6■□□□□ 0.09
SNRNP40Q96DI7 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC15.6■□□□□ 0.09
SNRNP40Q96DI7 AC093520.2-201ENST00000561830 333 ntBASIC15.6■□□□□ 0.09
SNRNP40Q96DI7 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.6■□□□□ 0.09
SNRNP40Q96DI7 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SNRNP40Q96DI7 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
SNRNP40Q96DI7 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
SNRNP40Q96DI7 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC15.6■□□□□ 0.09
SNRNP40Q96DI7 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
SNRNP40Q96DI7 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SNRNP40Q96DI7 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
SNRNP40Q96DI7 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC15.6■□□□□ 0.09
SNRNP40Q96DI7 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SNRNP40Q96DI7 AC004408.2-201ENST00000623613 2777 ntBASIC15.6■□□□□ 0.09
SNRNP40Q96DI7 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC15.6■□□□□ 0.09
SNRNP40Q96DI7 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.6■□□□□ 0.09
SNRNP40Q96DI7 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC15.6■□□□□ 0.09
SNRNP40Q96DI7 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
SNRNP40Q96DI7 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SNRNP40Q96DI7 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SNRNP40Q96DI7 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SNRNP40Q96DI7 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC15.59■□□□□ 0.09
SNRNP40Q96DI7 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SNRNP40Q96DI7 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SNRNP40Q96DI7 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
SNRNP40Q96DI7 AC093677.2-201ENST00000600169 1863 ntBASIC15.59■□□□□ 0.09
SNRNP40Q96DI7 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SNRNP40Q96DI7 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SNRNP40Q96DI7 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC15.59■□□□□ 0.09
SNRNP40Q96DI7 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SNRNP40Q96DI7 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC15.59■□□□□ 0.09
SNRNP40Q96DI7 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SNRNP40Q96DI7 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SNRNP40Q96DI7 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC15.59■□□□□ 0.09
SNRNP40Q96DI7 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
SNRNP40Q96DI7 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15.59■□□□□ 0.09
SNRNP40Q96DI7 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC15.59■□□□□ 0.09
SNRNP40Q96DI7 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC15.59■□□□□ 0.09
SNRNP40Q96DI7 SLBP-205ENST00000488267 987 ntTSL 2 BASIC15.59■□□□□ 0.09
SNRNP40Q96DI7 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
SNRNP40Q96DI7 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SNRNP40Q96DI7 ACTL9-202ENST00000612068 1252 ntBASIC15.59■□□□□ 0.09
SNRNP40Q96DI7 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC15.59■□□□□ 0.09
SNRNP40Q96DI7 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.59■□□□□ 0.09
SNRNP40Q96DI7 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC15.59■□□□□ 0.09
SNRNP40Q96DI7 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SNRNP40Q96DI7 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
SNRNP40Q96DI7 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SNRNP40Q96DI7 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
SNRNP40Q96DI7 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
SNRNP40Q96DI7 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
SNRNP40Q96DI7 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
SNRNP40Q96DI7 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
SNRNP40Q96DI7 CROCCP3-202ENST00000420820 1947 ntBASIC15.58■□□□□ 0.09
SNRNP40Q96DI7 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
SNRNP40Q96DI7 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC15.58■□□□□ 0.09
SNRNP40Q96DI7 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms