Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NEDD1Q8NHV4 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NEDD1Q8NHV4 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NEDD1Q8NHV4 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
NEDD1Q8NHV4 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC20.23■□□□□ 0.83
NEDD1Q8NHV4 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NEDD1Q8NHV4 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
NEDD1Q8NHV4 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.23■□□□□ 0.83
NEDD1Q8NHV4 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
NEDD1Q8NHV4 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
NEDD1Q8NHV4 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
NEDD1Q8NHV4 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
NEDD1Q8NHV4 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NEDD1Q8NHV4 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC20.23■□□□□ 0.83
NEDD1Q8NHV4 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC20.23■□□□□ 0.83
NEDD1Q8NHV4 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC20.23■□□□□ 0.83
NEDD1Q8NHV4 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC20.23■□□□□ 0.83
NEDD1Q8NHV4 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
NEDD1Q8NHV4 TPR-209ENST00000613151 2478 ntTSL 5 BASIC20.23■□□□□ 0.83
NEDD1Q8NHV4 AC010654.1-201ENST00000615722 808 ntBASIC20.23■□□□□ 0.83
NEDD1Q8NHV4 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NEDD1Q8NHV4 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC20.23■□□□□ 0.83
NEDD1Q8NHV4 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NEDD1Q8NHV4 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NEDD1Q8NHV4 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC20.23■□□□□ 0.83
NEDD1Q8NHV4 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NEDD1Q8NHV4 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NEDD1Q8NHV4 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
NEDD1Q8NHV4 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
NEDD1Q8NHV4 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NEDD1Q8NHV4 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NEDD1Q8NHV4 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
NEDD1Q8NHV4 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC20.22■□□□□ 0.83
NEDD1Q8NHV4 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NEDD1Q8NHV4 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC20.22■□□□□ 0.83
NEDD1Q8NHV4 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NEDD1Q8NHV4 AC016396.2-201ENST00000562575 1417 ntBASIC20.22■□□□□ 0.83
NEDD1Q8NHV4 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NEDD1Q8NHV4 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
NEDD1Q8NHV4 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NEDD1Q8NHV4 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
NEDD1Q8NHV4 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC20.22■□□□□ 0.83
NEDD1Q8NHV4 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC20.22■□□□□ 0.83
NEDD1Q8NHV4 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC20.22■□□□□ 0.83
NEDD1Q8NHV4 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
NEDD1Q8NHV4 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC20.22■□□□□ 0.83
NEDD1Q8NHV4 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NEDD1Q8NHV4 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NEDD1Q8NHV4 AC067852.2-201ENST00000590513 2313 ntBASIC20.21■□□□□ 0.83
NEDD1Q8NHV4 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NEDD1Q8NHV4 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
NEDD1Q8NHV4 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
NEDD1Q8NHV4 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC20.21■□□□□ 0.83
NEDD1Q8NHV4 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC20.21■□□□□ 0.83
NEDD1Q8NHV4 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
NEDD1Q8NHV4 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC20.21■□□□□ 0.83
NEDD1Q8NHV4 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
NEDD1Q8NHV4 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC20.21■□□□□ 0.83
NEDD1Q8NHV4 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NEDD1Q8NHV4 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC20.21■□□□□ 0.83
NEDD1Q8NHV4 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
NEDD1Q8NHV4 IGLL3P-201ENST00000412472 434 ntBASIC20.21■□□□□ 0.83
NEDD1Q8NHV4 RPP21-221ENST00000428040 594 ntTSL 2 BASIC20.21■□□□□ 0.83
NEDD1Q8NHV4 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NEDD1Q8NHV4 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NEDD1Q8NHV4 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
NEDD1Q8NHV4 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
NEDD1Q8NHV4 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
NEDD1Q8NHV4 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NEDD1Q8NHV4 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NEDD1Q8NHV4 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC20.21■□□□□ 0.83
NEDD1Q8NHV4 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC20.21■□□□□ 0.83
NEDD1Q8NHV4 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC20.21■□□□□ 0.83
NEDD1Q8NHV4 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NEDD1Q8NHV4 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
NEDD1Q8NHV4 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NEDD1Q8NHV4 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.83
NEDD1Q8NHV4 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
NEDD1Q8NHV4 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
NEDD1Q8NHV4 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NEDD1Q8NHV4 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC20.2■□□□□ 0.82
NEDD1Q8NHV4 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NEDD1Q8NHV4 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NEDD1Q8NHV4 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NEDD1Q8NHV4 AL133373.2-201ENST00000623187 2828 ntBASIC20.2■□□□□ 0.82
NEDD1Q8NHV4 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NEDD1Q8NHV4 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC20.2■□□□□ 0.82
NEDD1Q8NHV4 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC20.2■□□□□ 0.82
NEDD1Q8NHV4 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC20.2■□□□□ 0.82
NEDD1Q8NHV4 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC20.2■□□□□ 0.82
NEDD1Q8NHV4 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC20.2■□□□□ 0.82
NEDD1Q8NHV4 AC040169.1-201ENST00000565382 521 ntBASIC20.2■□□□□ 0.82
NEDD1Q8NHV4 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC20.2■□□□□ 0.82
NEDD1Q8NHV4 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NEDD1Q8NHV4 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NEDD1Q8NHV4 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC20.2■□□□□ 0.82
NEDD1Q8NHV4 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NEDD1Q8NHV4 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NEDD1Q8NHV4 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC20.19■□□□□ 0.82
NEDD1Q8NHV4 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms