Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 DLST-202ENST00000334220 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SVIPQ8NHG7 AC092611.1-201ENST00000514269 2565 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SVIPQ8NHG7 PRNT-201ENST00000326539 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SVIPQ8NHG7 NOS3-203ENST00000461406 3644 ntTSL 2 BASIC10.81□□□□□ -0.68
SVIPQ8NHG7 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
SVIPQ8NHG7 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC10.81□□□□□ -0.68
SVIPQ8NHG7 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SVIPQ8NHG7 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC10.81□□□□□ -0.68
SVIPQ8NHG7 AC079328.2-201ENST00000561241 3354 ntBASIC10.81□□□□□ -0.68
SVIPQ8NHG7 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
SVIPQ8NHG7 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SVIPQ8NHG7 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
SVIPQ8NHG7 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
SVIPQ8NHG7 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SVIPQ8NHG7 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SVIPQ8NHG7 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC10.81□□□□□ -0.68
SVIPQ8NHG7 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SVIPQ8NHG7 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SVIPQ8NHG7 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SVIPQ8NHG7 DDX24-210ENST00000622786 1730 ntTSL 5 BASIC10.81□□□□□ -0.68
SVIPQ8NHG7 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
SVIPQ8NHG7 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
SVIPQ8NHG7 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SVIPQ8NHG7 PDIA6-203ENST00000404371 2682 ntTSL 2 BASIC10.81□□□□□ -0.68
SVIPQ8NHG7 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SVIPQ8NHG7 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC10.81□□□□□ -0.68
SVIPQ8NHG7 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC10.81□□□□□ -0.68
SVIPQ8NHG7 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
SVIPQ8NHG7 WT1-209ENST00000530998 2421 ntTSL 2 BASIC10.8□□□□□ -0.68
SVIPQ8NHG7 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SVIPQ8NHG7 CES1-201ENST00000360526 2006 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
SVIPQ8NHG7 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
SVIPQ8NHG7 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
SVIPQ8NHG7 CAMKK1-203ENST00000381769 3508 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
SVIPQ8NHG7 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SVIPQ8NHG7 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SVIPQ8NHG7 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC10.8□□□□□ -0.68
SVIPQ8NHG7 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SVIPQ8NHG7 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SVIPQ8NHG7 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
SVIPQ8NHG7 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SVIPQ8NHG7 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
SVIPQ8NHG7 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC10.8□□□□□ -0.68
SVIPQ8NHG7 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SVIPQ8NHG7 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
SVIPQ8NHG7 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
SVIPQ8NHG7 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
SVIPQ8NHG7 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC10.8□□□□□ -0.68
SVIPQ8NHG7 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SVIPQ8NHG7 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SVIPQ8NHG7 GCA-201ENST00000233612 1694 ntTSL 2 BASIC10.8□□□□□ -0.68
SVIPQ8NHG7 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SVIPQ8NHG7 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
SVIPQ8NHG7 HECW1-IT1-201ENST00000322220 1839 ntTSL 2 BASIC10.8□□□□□ -0.68
SVIPQ8NHG7 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
SVIPQ8NHG7 CIITA-212ENST00000618207 2844 ntTSL 5 BASIC10.8□□□□□ -0.68
SVIPQ8NHG7 PDE4C-206ENST00000594465 2988 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
SVIPQ8NHG7 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC10.8□□□□□ -0.68
SVIPQ8NHG7 TXNL4B-201ENST00000268483 2556 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SVIPQ8NHG7 AC022532.1-201ENST00000624563 1728 ntBASIC10.8□□□□□ -0.68
SVIPQ8NHG7 SEZ6L2-202ENST00000346932 3015 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
SVIPQ8NHG7 CCDC122-201ENST00000444614 2009 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
SVIPQ8NHG7 CYP39A1-201ENST00000275016 2176 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SVIPQ8NHG7 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
SVIPQ8NHG7 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
SVIPQ8NHG7 MATR3-237ENST00000509990 3249 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
SVIPQ8NHG7 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
SVIPQ8NHG7 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
SVIPQ8NHG7 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
SVIPQ8NHG7 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC10.8□□□□□ -0.68
SVIPQ8NHG7 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SVIPQ8NHG7 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC10.8□□□□□ -0.68
SVIPQ8NHG7 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SVIPQ8NHG7 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SVIPQ8NHG7 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC10.8□□□□□ -0.68
SVIPQ8NHG7 DGKZ-216ENST00000528615 2692 ntTSL 5 BASIC10.8□□□□□ -0.68
SVIPQ8NHG7 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
SVIPQ8NHG7 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC10.8□□□□□ -0.68
SVIPQ8NHG7 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SVIPQ8NHG7 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
SVIPQ8NHG7 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
SVIPQ8NHG7 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
SVIPQ8NHG7 BOLL-201ENST00000282278 2742 ntTSL 2 BASIC10.79□□□□□ -0.68
SVIPQ8NHG7 FBLN5-201ENST00000267620 2423 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
SVIPQ8NHG7 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC10.79□□□□□ -0.68
SVIPQ8NHG7 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
SVIPQ8NHG7 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
SVIPQ8NHG7 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
SVIPQ8NHG7 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SVIPQ8NHG7 LINC01483-201ENST00000433856 3085 ntTSL 2 BASIC10.79□□□□□ -0.68
SVIPQ8NHG7 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC10.79□□□□□ -0.68
SVIPQ8NHG7 AC114480.1-201ENST00000465933 2919 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
SVIPQ8NHG7 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
SVIPQ8NHG7 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
SVIPQ8NHG7 FP565260.1-201ENST00000617716 3264 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SVIPQ8NHG7 TNK1-201ENST00000570896 3122 ntAPPRIS P3 TSL 5 BASIC10.79□□□□□ -0.68
SVIPQ8NHG7 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC10.79□□□□□ -0.68
SVIPQ8NHG7 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SVIPQ8NHG7 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
SVIPQ8NHG7 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms