Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NPAS3Q8IXF0 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.98■□□□□ 0.47
NPAS3Q8IXF0 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.98■□□□□ 0.47
NPAS3Q8IXF0 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NPAS3Q8IXF0 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NPAS3Q8IXF0 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NPAS3Q8IXF0 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NPAS3Q8IXF0 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NPAS3Q8IXF0 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.98■□□□□ 0.47
NPAS3Q8IXF0 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC17.98■□□□□ 0.47
NPAS3Q8IXF0 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
NPAS3Q8IXF0 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NPAS3Q8IXF0 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NPAS3Q8IXF0 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
NPAS3Q8IXF0 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NPAS3Q8IXF0 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NPAS3Q8IXF0 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NPAS3Q8IXF0 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NPAS3Q8IXF0 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NPAS3Q8IXF0 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NPAS3Q8IXF0 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NPAS3Q8IXF0 MIR770-201ENST00000390219 98 ntBASIC17.97■□□□□ 0.47
NPAS3Q8IXF0 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.97■□□□□ 0.47
NPAS3Q8IXF0 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
NPAS3Q8IXF0 FAM185BP-201ENST00000443595 716 ntBASIC17.97■□□□□ 0.47
NPAS3Q8IXF0 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.97■□□□□ 0.47
NPAS3Q8IXF0 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC17.97■□□□□ 0.47
NPAS3Q8IXF0 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
NPAS3Q8IXF0 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC17.97■□□□□ 0.47
NPAS3Q8IXF0 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NPAS3Q8IXF0 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
NPAS3Q8IXF0 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.97■□□□□ 0.47
NPAS3Q8IXF0 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NPAS3Q8IXF0 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.97■□□□□ 0.47
NPAS3Q8IXF0 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC17.97■□□□□ 0.47
NPAS3Q8IXF0 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
NPAS3Q8IXF0 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
NPAS3Q8IXF0 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC17.97■□□□□ 0.47
NPAS3Q8IXF0 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
NPAS3Q8IXF0 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.97■□□□□ 0.47
NPAS3Q8IXF0 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
NPAS3Q8IXF0 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.97■□□□□ 0.47
NPAS3Q8IXF0 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NPAS3Q8IXF0 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
NPAS3Q8IXF0 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NPAS3Q8IXF0 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NPAS3Q8IXF0 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NPAS3Q8IXF0 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NPAS3Q8IXF0 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
NPAS3Q8IXF0 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NPAS3Q8IXF0 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
NPAS3Q8IXF0 AC090164.3-201ENST00000610780 2143 ntBASIC17.96■□□□□ 0.47
NPAS3Q8IXF0 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NPAS3Q8IXF0 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NPAS3Q8IXF0 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
NPAS3Q8IXF0 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NPAS3Q8IXF0 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NPAS3Q8IXF0 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.96■□□□□ 0.47
NPAS3Q8IXF0 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NPAS3Q8IXF0 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
NPAS3Q8IXF0 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.96■□□□□ 0.47
NPAS3Q8IXF0 AC004461.1-201ENST00000412461 403 ntBASIC17.96■□□□□ 0.47
NPAS3Q8IXF0 SYS1-203ENST00000414310 795 ntTSL 3 BASIC17.96■□□□□ 0.47
NPAS3Q8IXF0 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
NPAS3Q8IXF0 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.96■□□□□ 0.47
NPAS3Q8IXF0 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.96■□□□□ 0.47
NPAS3Q8IXF0 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.96■□□□□ 0.47
NPAS3Q8IXF0 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NPAS3Q8IXF0 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NPAS3Q8IXF0 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.96■□□□□ 0.47
NPAS3Q8IXF0 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC17.96■□□□□ 0.47
NPAS3Q8IXF0 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC17.96■□□□□ 0.47
NPAS3Q8IXF0 AC105339.1-204ENST00000636249 355 ntBASIC17.96■□□□□ 0.47
NPAS3Q8IXF0 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.96■□□□□ 0.47
NPAS3Q8IXF0 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NPAS3Q8IXF0 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
NPAS3Q8IXF0 KRT18P55-202ENST00000578578 1546 ntBASIC17.96■□□□□ 0.47
NPAS3Q8IXF0 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NPAS3Q8IXF0 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
NPAS3Q8IXF0 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
NPAS3Q8IXF0 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.96■□□□□ 0.47
NPAS3Q8IXF0 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NPAS3Q8IXF0 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
NPAS3Q8IXF0 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.95■□□□□ 0.46
NPAS3Q8IXF0 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.95■□□□□ 0.46
NPAS3Q8IXF0 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NPAS3Q8IXF0 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.95■□□□□ 0.46
NPAS3Q8IXF0 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NPAS3Q8IXF0 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NPAS3Q8IXF0 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
NPAS3Q8IXF0 AC092919.2-201ENST00000623631 1645 ntBASIC17.95■□□□□ 0.46
NPAS3Q8IXF0 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NPAS3Q8IXF0 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NPAS3Q8IXF0 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.95■□□□□ 0.46
NPAS3Q8IXF0 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NPAS3Q8IXF0 NABP1-203ENST00000409510 843 ntTSL 5 BASIC17.95■□□□□ 0.46
NPAS3Q8IXF0 FAM8A3P-201ENST00000427218 844 ntBASIC17.95■□□□□ 0.46
NPAS3Q8IXF0 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.95■□□□□ 0.46
NPAS3Q8IXF0 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
NPAS3Q8IXF0 ACTL9-202ENST00000612068 1252 ntBASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms