Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
VPS13BQ7Z7G8 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
VPS13BQ7Z7G8 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC10.66□□□□□ -0.7
VPS13BQ7Z7G8 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC10.66□□□□□ -0.7
VPS13BQ7Z7G8 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC10.66□□□□□ -0.7
VPS13BQ7Z7G8 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
VPS13BQ7Z7G8 TSFM-210ENST00000550559 897 ntTSL 5 BASIC10.66□□□□□ -0.7
VPS13BQ7Z7G8 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC10.66□□□□□ -0.7
VPS13BQ7Z7G8 AL138828.2-201ENST00000615812 383 ntBASIC10.66□□□□□ -0.7
VPS13BQ7Z7G8 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
VPS13BQ7Z7G8 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
VPS13BQ7Z7G8 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC10.65□□□□□ -0.7
VPS13BQ7Z7G8 AC008677.1-201ENST00000519230 1561 ntBASIC10.65□□□□□ -0.7
VPS13BQ7Z7G8 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
VPS13BQ7Z7G8 BX276092.7-203ENST00000637198 1536 ntBASIC10.65□□□□□ -0.7
VPS13BQ7Z7G8 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
VPS13BQ7Z7G8 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
VPS13BQ7Z7G8 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
VPS13BQ7Z7G8 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC10.65□□□□□ -0.7
VPS13BQ7Z7G8 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
VPS13BQ7Z7G8 CD276-201ENST00000318424 2738 ntTSL 5 BASIC10.65□□□□□ -0.7
VPS13BQ7Z7G8 EFTUD1P1-204ENST00000560401 1798 ntBASIC10.65□□□□□ -0.7
VPS13BQ7Z7G8 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC10.65□□□□□ -0.7
VPS13BQ7Z7G8 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.7
VPS13BQ7Z7G8 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
VPS13BQ7Z7G8 FAM86GP-201ENST00000448322 971 ntBASIC10.65□□□□□ -0.7
VPS13BQ7Z7G8 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC10.65□□□□□ -0.7
VPS13BQ7Z7G8 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC10.65□□□□□ -0.7
VPS13BQ7Z7G8 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC10.65□□□□□ -0.7
VPS13BQ7Z7G8 SPTSSB-204ENST00000617024 1292 ntBASIC10.65□□□□□ -0.7
VPS13BQ7Z7G8 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC10.65□□□□□ -0.7
VPS13BQ7Z7G8 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
VPS13BQ7Z7G8 AC009336.1-201ENST00000608941 1553 ntBASIC10.65□□□□□ -0.7
VPS13BQ7Z7G8 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
VPS13BQ7Z7G8 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
VPS13BQ7Z7G8 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
VPS13BQ7Z7G8 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC10.65□□□□□ -0.7
VPS13BQ7Z7G8 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
VPS13BQ7Z7G8 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
VPS13BQ7Z7G8 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC10.65□□□□□ -0.7
VPS13BQ7Z7G8 TDG-209ENST00000544861 1387 ntTSL 2 BASIC10.65□□□□□ -0.7
VPS13BQ7Z7G8 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
VPS13BQ7Z7G8 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
VPS13BQ7Z7G8 DDX43P3-201ENST00000441064 443 ntBASIC10.65□□□□□ -0.7
VPS13BQ7Z7G8 AL135744.1-201ENST00000565098 629 ntBASIC10.65□□□□□ -0.7
VPS13BQ7Z7G8 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC10.65□□□□□ -0.7
VPS13BQ7Z7G8 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC10.65□□□□□ -0.7
VPS13BQ7Z7G8 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
VPS13BQ7Z7G8 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
VPS13BQ7Z7G8 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
VPS13BQ7Z7G8 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC10.65□□□□□ -0.7
VPS13BQ7Z7G8 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC10.65□□□□□ -0.7
VPS13BQ7Z7G8 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
VPS13BQ7Z7G8 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
VPS13BQ7Z7G8 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC10.65□□□□□ -0.71
VPS13BQ7Z7G8 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
VPS13BQ7Z7G8 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC10.65□□□□□ -0.71
VPS13BQ7Z7G8 TMPRSS11CP-201ENST00000453277 683 ntBASIC10.65□□□□□ -0.71
VPS13BQ7Z7G8 AC112191.1-201ENST00000523689 701 ntBASIC10.65□□□□□ -0.71
VPS13BQ7Z7G8 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.71
VPS13BQ7Z7G8 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
VPS13BQ7Z7G8 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
VPS13BQ7Z7G8 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC10.65□□□□□ -0.71
VPS13BQ7Z7G8 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.71
VPS13BQ7Z7G8 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.71
VPS13BQ7Z7G8 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
VPS13BQ7Z7G8 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
VPS13BQ7Z7G8 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC10.65□□□□□ -0.71
VPS13BQ7Z7G8 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
VPS13BQ7Z7G8 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC10.64□□□□□ -0.71
VPS13BQ7Z7G8 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
VPS13BQ7Z7G8 AC006116.8-202ENST00000587620 1550 ntBASIC10.64□□□□□ -0.71
VPS13BQ7Z7G8 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
VPS13BQ7Z7G8 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
VPS13BQ7Z7G8 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
VPS13BQ7Z7G8 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
VPS13BQ7Z7G8 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
VPS13BQ7Z7G8 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
VPS13BQ7Z7G8 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC10.64□□□□□ -0.71
VPS13BQ7Z7G8 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
VPS13BQ7Z7G8 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC10.64□□□□□ -0.71
VPS13BQ7Z7G8 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC10.64□□□□□ -0.71
VPS13BQ7Z7G8 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
VPS13BQ7Z7G8 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
VPS13BQ7Z7G8 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC10.64□□□□□ -0.71
VPS13BQ7Z7G8 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC10.64□□□□□ -0.71
VPS13BQ7Z7G8 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
VPS13BQ7Z7G8 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC10.64□□□□□ -0.71
VPS13BQ7Z7G8 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC10.64□□□□□ -0.71
VPS13BQ7Z7G8 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
VPS13BQ7Z7G8 AC103564.2-201ENST00000432853 1299 ntBASIC10.64□□□□□ -0.71
VPS13BQ7Z7G8 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC10.64□□□□□ -0.71
VPS13BQ7Z7G8 AL592309.1-201ENST00000443127 649 ntBASIC10.64□□□□□ -0.71
VPS13BQ7Z7G8 SLC25A6P2-201ENST00000497974 877 ntBASIC10.64□□□□□ -0.71
VPS13BQ7Z7G8 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
VPS13BQ7Z7G8 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
VPS13BQ7Z7G8 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
VPS13BQ7Z7G8 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
VPS13BQ7Z7G8 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC10.64□□□□□ -0.71
VPS13BQ7Z7G8 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC10.64□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms