Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
MRPL55Q7Z7F7 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
MRPL55Q7Z7F7 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
MRPL55Q7Z7F7 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC11.27□□□□□ -0.61
MRPL55Q7Z7F7 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
MRPL55Q7Z7F7 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC11.27□□□□□ -0.61
MRPL55Q7Z7F7 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
MRPL55Q7Z7F7 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.61
MRPL55Q7Z7F7 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC11.27□□□□□ -0.61
MRPL55Q7Z7F7 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
MRPL55Q7Z7F7 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
MRPL55Q7Z7F7 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
MRPL55Q7Z7F7 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
MRPL55Q7Z7F7 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
MRPL55Q7Z7F7 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
MRPL55Q7Z7F7 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
MRPL55Q7Z7F7 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
MRPL55Q7Z7F7 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
MRPL55Q7Z7F7 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
MRPL55Q7Z7F7 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
MRPL55Q7Z7F7 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC11.26□□□□□ -0.61
MRPL55Q7Z7F7 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
MRPL55Q7Z7F7 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
MRPL55Q7Z7F7 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC11.26□□□□□ -0.61
MRPL55Q7Z7F7 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
MRPL55Q7Z7F7 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC11.26□□□□□ -0.61
MRPL55Q7Z7F7 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
MRPL55Q7Z7F7 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
MRPL55Q7Z7F7 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
MRPL55Q7Z7F7 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
MRPL55Q7Z7F7 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC11.26□□□□□ -0.61
MRPL55Q7Z7F7 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
MRPL55Q7Z7F7 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
MRPL55Q7Z7F7 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC11.26□□□□□ -0.61
MRPL55Q7Z7F7 BX276092.7-203ENST00000637198 1536 ntBASIC11.26□□□□□ -0.61
MRPL55Q7Z7F7 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
MRPL55Q7Z7F7 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC11.26□□□□□ -0.61
MRPL55Q7Z7F7 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
MRPL55Q7Z7F7 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
MRPL55Q7Z7F7 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
MRPL55Q7Z7F7 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
MRPL55Q7Z7F7 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
MRPL55Q7Z7F7 SPDYE15P-201ENST00000424157 909 ntBASIC11.26□□□□□ -0.61
MRPL55Q7Z7F7 HLA-F-220ENST00000434407 884 ntBASIC11.26□□□□□ -0.61
MRPL55Q7Z7F7 HOMER2P1-201ENST00000455653 964 ntBASIC11.26□□□□□ -0.61
MRPL55Q7Z7F7 YBX1P2-201ENST00000489612 999 ntBASIC11.26□□□□□ -0.61
MRPL55Q7Z7F7 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
MRPL55Q7Z7F7 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
MRPL55Q7Z7F7 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC11.26□□□□□ -0.61
MRPL55Q7Z7F7 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC11.26□□□□□ -0.61
MRPL55Q7Z7F7 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC11.26□□□□□ -0.61
MRPL55Q7Z7F7 AC139887.4-201ENST00000607877 719 ntBASIC11.26□□□□□ -0.61
MRPL55Q7Z7F7 SPEG-225ENST00000617028 815 ntTSL 5 BASIC11.26□□□□□ -0.61
MRPL55Q7Z7F7 AC011558.1-201ENST00000623459 338 ntBASIC11.26□□□□□ -0.61
MRPL55Q7Z7F7 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
MRPL55Q7Z7F7 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
MRPL55Q7Z7F7 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
MRPL55Q7Z7F7 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
MRPL55Q7Z7F7 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC11.26□□□□□ -0.61
MRPL55Q7Z7F7 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
MRPL55Q7Z7F7 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC11.26□□□□□ -0.61
MRPL55Q7Z7F7 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
MRPL55Q7Z7F7 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC11.26□□□□□ -0.61
MRPL55Q7Z7F7 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
MRPL55Q7Z7F7 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
MRPL55Q7Z7F7 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
MRPL55Q7Z7F7 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC11.26□□□□□ -0.61
MRPL55Q7Z7F7 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC11.26□□□□□ -0.61
MRPL55Q7Z7F7 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
MRPL55Q7Z7F7 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
MRPL55Q7Z7F7 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC11.26□□□□□ -0.61
MRPL55Q7Z7F7 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
MRPL55Q7Z7F7 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
MRPL55Q7Z7F7 NORAD-201ENST00000565493 5339 ntBASIC11.26□□□□□ -0.61
MRPL55Q7Z7F7 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
MRPL55Q7Z7F7 AC108860.2-201ENST00000562760 2183 ntBASIC11.26□□□□□ -0.61
MRPL55Q7Z7F7 PRORSD1P-202ENST00000563365 2154 ntBASIC11.26□□□□□ -0.61
MRPL55Q7Z7F7 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC11.25□□□□□ -0.61
MRPL55Q7Z7F7 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
MRPL55Q7Z7F7 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
MRPL55Q7Z7F7 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC11.25□□□□□ -0.61
MRPL55Q7Z7F7 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
MRPL55Q7Z7F7 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
MRPL55Q7Z7F7 AC008894.3-201ENST00000624324 3103 ntBASIC11.25□□□□□ -0.61
MRPL55Q7Z7F7 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
MRPL55Q7Z7F7 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
MRPL55Q7Z7F7 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
MRPL55Q7Z7F7 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC11.25□□□□□ -0.61
MRPL55Q7Z7F7 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
MRPL55Q7Z7F7 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
MRPL55Q7Z7F7 LTF-203ENST00000426532 2494 ntTSL 2 BASIC11.25□□□□□ -0.61
MRPL55Q7Z7F7 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC11.25□□□□□ -0.61
MRPL55Q7Z7F7 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
MRPL55Q7Z7F7 TERF1P1-201ENST00000311003 1181 ntBASIC11.25□□□□□ -0.61
MRPL55Q7Z7F7 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
MRPL55Q7Z7F7 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
MRPL55Q7Z7F7 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
MRPL55Q7Z7F7 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC11.25□□□□□ -0.61
MRPL55Q7Z7F7 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
MRPL55Q7Z7F7 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC11.25□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms