Protein–RNA interactions for Protein: Q12986

NFX1, Transcriptional repressor NF-X1, humanhuman

Known RBP Predictions only

Length 1,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFX1Q12986 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
NFX1Q12986 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NFX1Q12986 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NFX1Q12986 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.16■□□□□ 0.66
NFX1Q12986 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NFX1Q12986 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NFX1Q12986 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
NFX1Q12986 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC19.16■□□□□ 0.66
NFX1Q12986 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NFX1Q12986 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NFX1Q12986 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
NFX1Q12986 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NFX1Q12986 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
NFX1Q12986 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NFX1Q12986 RPS8P6-201ENST00000426177 609 ntBASIC19.16■□□□□ 0.66
NFX1Q12986 KRT18P2-201ENST00000447938 1258 ntBASIC19.16■□□□□ 0.66
NFX1Q12986 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC19.16■□□□□ 0.66
NFX1Q12986 ARTN-206ENST00000472435 402 ntTSL 3 BASIC19.16■□□□□ 0.66
NFX1Q12986 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC19.16■□□□□ 0.66
NFX1Q12986 DHDH-204ENST00000523250 634 ntTSL 5 BASIC19.16■□□□□ 0.66
NFX1Q12986 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC19.16■□□□□ 0.66
NFX1Q12986 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC19.16■□□□□ 0.66
NFX1Q12986 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC19.16■□□□□ 0.66
NFX1Q12986 TCAP-202ENST00000578283 583 ntTSL 5 BASIC19.16■□□□□ 0.66
NFX1Q12986 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC19.16■□□□□ 0.66
NFX1Q12986 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NFX1Q12986 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC19.16■□□□□ 0.66
NFX1Q12986 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NFX1Q12986 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
NFX1Q12986 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
NFX1Q12986 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NFX1Q12986 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
NFX1Q12986 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NFX1Q12986 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.16■□□□□ 0.66
NFX1Q12986 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NFX1Q12986 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
NFX1Q12986 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
NFX1Q12986 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
NFX1Q12986 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
NFX1Q12986 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NFX1Q12986 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
NFX1Q12986 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NFX1Q12986 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC19.15■□□□□ 0.66
NFX1Q12986 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NFX1Q12986 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NFX1Q12986 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NFX1Q12986 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NFX1Q12986 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NFX1Q12986 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
NFX1Q12986 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NFX1Q12986 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC19.15■□□□□ 0.66
NFX1Q12986 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NFX1Q12986 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC19.15■□□□□ 0.66
NFX1Q12986 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC19.15■□□□□ 0.66
NFX1Q12986 CRYGEP-201ENST00000412192 528 ntBASIC19.15■□□□□ 0.66
NFX1Q12986 AC004832.2-201ENST00000426397 482 ntBASIC19.15■□□□□ 0.66
NFX1Q12986 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC19.15■□□□□ 0.66
NFX1Q12986 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC19.15■□□□□ 0.66
NFX1Q12986 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC19.15■□□□□ 0.66
NFX1Q12986 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC19.15■□□□□ 0.66
NFX1Q12986 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC19.15■□□□□ 0.66
NFX1Q12986 STK25P1-201ENST00000585406 838 ntBASIC19.15■□□□□ 0.66
NFX1Q12986 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC19.15■□□□□ 0.66
NFX1Q12986 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.15■□□□□ 0.66
NFX1Q12986 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NFX1Q12986 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NFX1Q12986 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
NFX1Q12986 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC19.15■□□□□ 0.66
NFX1Q12986 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NFX1Q12986 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NFX1Q12986 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NFX1Q12986 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
NFX1Q12986 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
NFX1Q12986 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
NFX1Q12986 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.15■□□□□ 0.66
NFX1Q12986 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
NFX1Q12986 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
NFX1Q12986 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
NFX1Q12986 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
NFX1Q12986 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
NFX1Q12986 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
NFX1Q12986 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
NFX1Q12986 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.14■□□□□ 0.66
NFX1Q12986 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC19.14■□□□□ 0.66
NFX1Q12986 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
NFX1Q12986 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.14■□□□□ 0.66
NFX1Q12986 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
NFX1Q12986 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NFX1Q12986 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NFX1Q12986 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
NFX1Q12986 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NFX1Q12986 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
NFX1Q12986 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.14■□□□□ 0.65
NFX1Q12986 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NFX1Q12986 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC19.14■□□□□ 0.65
NFX1Q12986 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
NFX1Q12986 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC19.14■□□□□ 0.65
NFX1Q12986 MIR4751-201ENST00000578027 74 ntBASIC19.14■□□□□ 0.65
NFX1Q12986 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC19.14■□□□□ 0.65
NFX1Q12986 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms