Protein–RNA interactions for Protein: Q06455

RUNX1T1, Protein CBFA2T1, humanhuman

Predictions only

Length 604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1T1Q06455 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RUNX1T1Q06455 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.18■□□□□ 0.18
RUNX1T1Q06455 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RUNX1T1Q06455 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RUNX1T1Q06455 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.18■□□□□ 0.18
RUNX1T1Q06455 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.18■□□□□ 0.18
RUNX1T1Q06455 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.18■□□□□ 0.18
RUNX1T1Q06455 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.18■□□□□ 0.18
RUNX1T1Q06455 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.18■□□□□ 0.18
RUNX1T1Q06455 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC16.18■□□□□ 0.18
RUNX1T1Q06455 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RUNX1T1Q06455 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.18■□□□□ 0.18
RUNX1T1Q06455 AC140113.3-201ENST00000605663 199 ntBASIC16.18■□□□□ 0.18
RUNX1T1Q06455 AC011558.1-201ENST00000623459 338 ntBASIC16.18■□□□□ 0.18
RUNX1T1Q06455 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
RUNX1T1Q06455 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.18■□□□□ 0.18
RUNX1T1Q06455 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RUNX1T1Q06455 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
RUNX1T1Q06455 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RUNX1T1Q06455 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
RUNX1T1Q06455 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
RUNX1T1Q06455 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RUNX1T1Q06455 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
RUNX1T1Q06455 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.18■□□□□ 0.18
RUNX1T1Q06455 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RUNX1T1Q06455 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.18■□□□□ 0.18
RUNX1T1Q06455 AC132938.6-201ENST00000623828 1655 ntBASIC16.18■□□□□ 0.18
RUNX1T1Q06455 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
RUNX1T1Q06455 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RUNX1T1Q06455 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RUNX1T1Q06455 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.17■□□□□ 0.18
RUNX1T1Q06455 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
RUNX1T1Q06455 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
RUNX1T1Q06455 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RUNX1T1Q06455 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
RUNX1T1Q06455 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
RUNX1T1Q06455 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RUNX1T1Q06455 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RUNX1T1Q06455 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RUNX1T1Q06455 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RUNX1T1Q06455 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RUNX1T1Q06455 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RUNX1T1Q06455 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RUNX1T1Q06455 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RUNX1T1Q06455 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC16.17■□□□□ 0.18
RUNX1T1Q06455 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.17■□□□□ 0.18
RUNX1T1Q06455 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RUNX1T1Q06455 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RUNX1T1Q06455 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.17■□□□□ 0.18
RUNX1T1Q06455 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
RUNX1T1Q06455 PVRIG2P-201ENST00000435460 978 ntBASIC16.17■□□□□ 0.18
RUNX1T1Q06455 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.17■□□□□ 0.18
RUNX1T1Q06455 COX11P1-201ENST00000489116 835 ntBASIC16.17■□□□□ 0.18
RUNX1T1Q06455 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC16.17■□□□□ 0.18
RUNX1T1Q06455 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.17■□□□□ 0.18
RUNX1T1Q06455 AC139887.4-201ENST00000607877 719 ntBASIC16.17■□□□□ 0.18
RUNX1T1Q06455 AC079602.3-201ENST00000623931 403 ntBASIC16.17■□□□□ 0.18
RUNX1T1Q06455 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.17■□□□□ 0.18
RUNX1T1Q06455 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
RUNX1T1Q06455 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.17■□□□□ 0.18
RUNX1T1Q06455 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
RUNX1T1Q06455 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RUNX1T1Q06455 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
RUNX1T1Q06455 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
RUNX1T1Q06455 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RUNX1T1Q06455 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RUNX1T1Q06455 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RUNX1T1Q06455 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
RUNX1T1Q06455 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
RUNX1T1Q06455 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
RUNX1T1Q06455 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RUNX1T1Q06455 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RUNX1T1Q06455 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.16■□□□□ 0.18
RUNX1T1Q06455 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RUNX1T1Q06455 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RUNX1T1Q06455 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16.16■□□□□ 0.18
RUNX1T1Q06455 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.16■□□□□ 0.18
RUNX1T1Q06455 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
RUNX1T1Q06455 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RUNX1T1Q06455 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RUNX1T1Q06455 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
RUNX1T1Q06455 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RUNX1T1Q06455 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.16■□□□□ 0.18
RUNX1T1Q06455 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.16■□□□□ 0.18
RUNX1T1Q06455 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
RUNX1T1Q06455 KRT18P57-201ENST00000443599 1254 ntBASIC16.16■□□□□ 0.18
RUNX1T1Q06455 RASA4DP-201ENST00000460726 1199 ntBASIC16.16■□□□□ 0.18
RUNX1T1Q06455 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
RUNX1T1Q06455 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.16■□□□□ 0.18
RUNX1T1Q06455 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
RUNX1T1Q06455 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
RUNX1T1Q06455 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RUNX1T1Q06455 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
RUNX1T1Q06455 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RUNX1T1Q06455 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RUNX1T1Q06455 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RUNX1T1Q06455 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RUNX1T1Q06455 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
RUNX1T1Q06455 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
RUNX1T1Q06455 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms