Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.02■□□□□ 0.16
CLDN20P56880 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
CLDN20P56880 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN20P56880 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
CLDN20P56880 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.02■□□□□ 0.16
CLDN20P56880 AL121761.2-201ENST00000598007 1648 ntBASIC16.02■□□□□ 0.16
CLDN20P56880 AL162727.3-201ENST00000635661 2787 ntBASIC16.02■□□□□ 0.16
CLDN20P56880 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
CLDN20P56880 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.02■□□□□ 0.16
CLDN20P56880 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN20P56880 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.02■□□□□ 0.16
CLDN20P56880 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN20P56880 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN20P56880 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CLDN20P56880 KRT16P4-201ENST00000453883 522 ntBASIC16.02■□□□□ 0.16
CLDN20P56880 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN20P56880 AC009533.2-201ENST00000543664 586 ntBASIC16.02■□□□□ 0.16
CLDN20P56880 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.02■□□□□ 0.16
CLDN20P56880 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN20P56880 IFNL4P1-201ENST00000607083 540 ntBASIC16.02■□□□□ 0.16
CLDN20P56880 AC114341.1-201ENST00000618070 349 ntBASIC16.02■□□□□ 0.16
CLDN20P56880 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.02■□□□□ 0.16
CLDN20P56880 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLDN20P56880 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.02■□□□□ 0.16
CLDN20P56880 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CLDN20P56880 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CLDN20P56880 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CLDN20P56880 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
CLDN20P56880 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CLDN20P56880 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
CLDN20P56880 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.02■□□□□ 0.15
CLDN20P56880 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.02■□□□□ 0.15
CLDN20P56880 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CLDN20P56880 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.02■□□□□ 0.15
CLDN20P56880 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN20P56880 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.01■□□□□ 0.15
CLDN20P56880 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.01■□□□□ 0.15
CLDN20P56880 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN20P56880 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
CLDN20P56880 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN20P56880 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CLDN20P56880 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN20P56880 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN20P56880 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN20P56880 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CLDN20P56880 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.01■□□□□ 0.15
CLDN20P56880 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.01■□□□□ 0.15
CLDN20P56880 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.01■□□□□ 0.15
CLDN20P56880 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN20P56880 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN20P56880 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN20P56880 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN20P56880 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.01■□□□□ 0.15
CLDN20P56880 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.01■□□□□ 0.15
CLDN20P56880 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.01■□□□□ 0.15
CLDN20P56880 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.01■□□□□ 0.15
CLDN20P56880 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN20P56880 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.01■□□□□ 0.15
CLDN20P56880 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.01■□□□□ 0.15
CLDN20P56880 AC111152.3-201ENST00000569699 673 ntBASIC16.01■□□□□ 0.15
CLDN20P56880 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.01■□□□□ 0.15
CLDN20P56880 MIR5100-201ENST00000579544 119 ntBASIC16.01■□□□□ 0.15
CLDN20P56880 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.01■□□□□ 0.15
CLDN20P56880 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.01■□□□□ 0.15
CLDN20P56880 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.01■□□□□ 0.15
CLDN20P56880 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CLDN20P56880 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CLDN20P56880 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN20P56880 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN20P56880 AP001094.4-201ENST00000579008 2176 ntBASIC16.01■□□□□ 0.15
CLDN20P56880 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
CLDN20P56880 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.01■□□□□ 0.15
CLDN20P56880 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN20P56880 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.01■□□□□ 0.15
CLDN20P56880 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
CLDN20P56880 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN20P56880 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.01■□□□□ 0.15
CLDN20P56880 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN20P56880 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDN20P56880 AC008894.3-201ENST00000624324 3103 ntBASIC16.01■□□□□ 0.15
CLDN20P56880 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CLDN20P56880 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16■□□□□ 0.15
CLDN20P56880 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16■□□□□ 0.15
CLDN20P56880 AC010460.3-201ENST00000511359 1579 ntBASIC16■□□□□ 0.15
CLDN20P56880 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CLDN20P56880 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16■□□□□ 0.15
CLDN20P56880 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
CLDN20P56880 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CLDN20P56880 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CLDN20P56880 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
CLDN20P56880 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16■□□□□ 0.15
CLDN20P56880 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CLDN20P56880 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLDN20P56880 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLDN20P56880 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16■□□□□ 0.15
CLDN20P56880 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16■□□□□ 0.15
CLDN20P56880 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16■□□□□ 0.15
CLDN20P56880 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16■□□□□ 0.15
CLDN20P56880 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16■□□□□ 0.15
CLDN20P56880 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms