Protein–RNA interactions for Protein: P54829

PTPN5, Tyrosine-protein phosphatase non-receptor type 5, humanhuman

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5P54829 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PTPN5P54829 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.99■□□□□ 0.47
PTPN5P54829 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
PTPN5P54829 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PTPN5P54829 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
PTPN5P54829 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PTPN5P54829 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PTPN5P54829 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
PTPN5P54829 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PTPN5P54829 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.98■□□□□ 0.47
PTPN5P54829 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTPN5P54829 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTPN5P54829 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.98■□□□□ 0.47
PTPN5P54829 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.98■□□□□ 0.47
PTPN5P54829 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.98■□□□□ 0.47
PTPN5P54829 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTPN5P54829 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTPN5P54829 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTPN5P54829 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC17.98■□□□□ 0.47
PTPN5P54829 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PTPN5P54829 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTPN5P54829 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.98■□□□□ 0.47
PTPN5P54829 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTPN5P54829 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTPN5P54829 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
PTPN5P54829 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTPN5P54829 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
PTPN5P54829 FAM58CP-201ENST00000435741 640 ntBASIC17.98■□□□□ 0.47
PTPN5P54829 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
PTPN5P54829 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PTPN5P54829 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.98■□□□□ 0.47
PTPN5P54829 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.98■□□□□ 0.47
PTPN5P54829 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.98■□□□□ 0.47
PTPN5P54829 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTPN5P54829 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
PTPN5P54829 LINC00628-201ENST00000628516 1289 ntBASIC17.98■□□□□ 0.47
PTPN5P54829 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTPN5P54829 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PTPN5P54829 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTPN5P54829 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.98■□□□□ 0.47
PTPN5P54829 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTPN5P54829 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.98■□□□□ 0.47
PTPN5P54829 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.98■□□□□ 0.47
PTPN5P54829 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.98■□□□□ 0.47
PTPN5P54829 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PTPN5P54829 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PTPN5P54829 AC079776.2-201ENST00000641154 1609 ntBASIC17.98■□□□□ 0.47
PTPN5P54829 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.98■□□□□ 0.47
PTPN5P54829 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
PTPN5P54829 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
PTPN5P54829 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTPN5P54829 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTPN5P54829 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTPN5P54829 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PTPN5P54829 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTPN5P54829 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
PTPN5P54829 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTPN5P54829 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.97■□□□□ 0.47
PTPN5P54829 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC17.97■□□□□ 0.47
PTPN5P54829 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
PTPN5P54829 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTPN5P54829 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.97■□□□□ 0.47
PTPN5P54829 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.97■□□□□ 0.47
PTPN5P54829 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.97■□□□□ 0.47
PTPN5P54829 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTPN5P54829 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.97■□□□□ 0.47
PTPN5P54829 BASP1P1-201ENST00000430708 665 ntBASIC17.97■□□□□ 0.47
PTPN5P54829 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.97■□□□□ 0.47
PTPN5P54829 AC109322.1-201ENST00000524499 1264 ntBASIC17.97■□□□□ 0.47
PTPN5P54829 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.97■□□□□ 0.47
PTPN5P54829 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC17.97■□□□□ 0.47
PTPN5P54829 NOP2-220ENST00000545915 630 ntTSL 2 BASIC17.97■□□□□ 0.47
PTPN5P54829 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC17.97■□□□□ 0.47
PTPN5P54829 AL390955.2-201ENST00000603032 514 ntBASIC17.97■□□□□ 0.47
PTPN5P54829 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
PTPN5P54829 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.97■□□□□ 0.47
PTPN5P54829 AL358472.5-202ENST00000641448 1267 ntBASIC17.97■□□□□ 0.47
PTPN5P54829 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTPN5P54829 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTPN5P54829 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
PTPN5P54829 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTPN5P54829 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTPN5P54829 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTPN5P54829 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
PTPN5P54829 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
PTPN5P54829 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PTPN5P54829 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.97■□□□□ 0.47
PTPN5P54829 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.96■□□□□ 0.47
PTPN5P54829 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
PTPN5P54829 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PTPN5P54829 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.96■□□□□ 0.47
PTPN5P54829 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PTPN5P54829 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PTPN5P54829 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.96■□□□□ 0.47
PTPN5P54829 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
PTPN5P54829 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PTPN5P54829 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
PTPN5P54829 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PTPN5P54829 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PTPN5P54829 NEK7-201ENST00000367383 586 ntTSL 2 BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms