Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
PDE6CP51160 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.87■□□□□ 0.61
PDE6CP51160 AC097374.2-201ENST00000618617 1306 ntBASIC18.87■□□□□ 0.61
PDE6CP51160 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.87■□□□□ 0.61
PDE6CP51160 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
PDE6CP51160 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC18.87■□□□□ 0.61
PDE6CP51160 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
PDE6CP51160 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
PDE6CP51160 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PDE6CP51160 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
PDE6CP51160 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDE6CP51160 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDE6CP51160 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC18.86■□□□□ 0.61
PDE6CP51160 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.86■□□□□ 0.61
PDE6CP51160 AC010460.3-201ENST00000511359 1579 ntBASIC18.86■□□□□ 0.61
PDE6CP51160 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PDE6CP51160 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC18.86■□□□□ 0.61
PDE6CP51160 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDE6CP51160 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDE6CP51160 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDE6CP51160 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.86■□□□□ 0.61
PDE6CP51160 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDE6CP51160 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.86■□□□□ 0.61
PDE6CP51160 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.86■□□□□ 0.61
PDE6CP51160 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC18.86■□□□□ 0.61
PDE6CP51160 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC18.86■□□□□ 0.61
PDE6CP51160 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
PDE6CP51160 AP005901.3-202ENST00000581653 237 ntBASIC18.86■□□□□ 0.61
PDE6CP51160 TMED1-207ENST00000591695 809 ntTSL 5 BASIC18.86■□□□□ 0.61
PDE6CP51160 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.86■□□□□ 0.61
PDE6CP51160 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18.86■□□□□ 0.61
PDE6CP51160 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.86■□□□□ 0.61
PDE6CP51160 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
PDE6CP51160 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.86■□□□□ 0.61
PDE6CP51160 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDE6CP51160 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDE6CP51160 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDE6CP51160 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.86■□□□□ 0.61
PDE6CP51160 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDE6CP51160 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PDE6CP51160 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.86■□□□□ 0.61
PDE6CP51160 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
PDE6CP51160 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDE6CP51160 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
PDE6CP51160 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
PDE6CP51160 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDE6CP51160 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
PDE6CP51160 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PDE6CP51160 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PDE6CP51160 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDE6CP51160 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
PDE6CP51160 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDE6CP51160 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDE6CP51160 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
PDE6CP51160 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.85■□□□□ 0.61
PDE6CP51160 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDE6CP51160 NUS1P2-201ENST00000417358 873 ntBASIC18.85■□□□□ 0.61
PDE6CP51160 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.85■□□□□ 0.61
PDE6CP51160 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.85■□□□□ 0.61
PDE6CP51160 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.85■□□□□ 0.61
PDE6CP51160 EMBP1-201ENST00000458200 901 ntBASIC18.85■□□□□ 0.61
PDE6CP51160 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.85■□□□□ 0.61
PDE6CP51160 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC18.85■□□□□ 0.61
PDE6CP51160 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.85■□□□□ 0.61
PDE6CP51160 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
PDE6CP51160 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.85■□□□□ 0.61
PDE6CP51160 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDE6CP51160 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
PDE6CP51160 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDE6CP51160 AC106820.2-201ENST00000563775 3264 ntBASIC18.85■□□□□ 0.61
PDE6CP51160 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
PDE6CP51160 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC18.85■□□□□ 0.61
PDE6CP51160 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDE6CP51160 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
PDE6CP51160 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDE6CP51160 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
PDE6CP51160 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PDE6CP51160 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDE6CP51160 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.84■□□□□ 0.61
PDE6CP51160 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDE6CP51160 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDE6CP51160 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PDE6CP51160 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.84■□□□□ 0.61
PDE6CP51160 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC18.84■□□□□ 0.61
PDE6CP51160 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDE6CP51160 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
PDE6CP51160 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PDE6CP51160 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDE6CP51160 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.84■□□□□ 0.61
PDE6CP51160 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
PDE6CP51160 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
PDE6CP51160 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.84■□□□□ 0.61
PDE6CP51160 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.84■□□□□ 0.61
PDE6CP51160 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.84■□□□□ 0.61
PDE6CP51160 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PDE6CP51160 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.84■□□□□ 0.61
PDE6CP51160 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PDE6CP51160 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.84■□□□□ 0.61
PDE6CP51160 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
PDE6CP51160 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms