Protein–RNA interactions for Protein: P50748

KNTC1, Kinetochore-associated protein 1, humanhuman

Predictions only

Length 2,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1P50748 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.5■□□□□ 0.23
KNTC1P50748 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.5■□□□□ 0.23
KNTC1P50748 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.5■□□□□ 0.23
KNTC1P50748 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
KNTC1P50748 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
KNTC1P50748 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
KNTC1P50748 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
KNTC1P50748 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
KNTC1P50748 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
KNTC1P50748 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
KNTC1P50748 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
KNTC1P50748 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
KNTC1P50748 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
KNTC1P50748 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
KNTC1P50748 AC073592.3-201ENST00000625118 1834 ntBASIC16.5■□□□□ 0.23
KNTC1P50748 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
KNTC1P50748 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.5■□□□□ 0.23
KNTC1P50748 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.5■□□□□ 0.23
KNTC1P50748 IGHV3-52-201ENST00000519770 353 ntBASIC16.5■□□□□ 0.23
KNTC1P50748 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.5■□□□□ 0.23
KNTC1P50748 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.5■□□□□ 0.23
KNTC1P50748 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
KNTC1P50748 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC16.5■□□□□ 0.23
KNTC1P50748 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
KNTC1P50748 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KNTC1P50748 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
KNTC1P50748 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
KNTC1P50748 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
KNTC1P50748 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC16.49■□□□□ 0.23
KNTC1P50748 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KNTC1P50748 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KNTC1P50748 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
KNTC1P50748 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KNTC1P50748 AL590787.1-201ENST00000568856 1315 ntBASIC16.49■□□□□ 0.23
KNTC1P50748 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
KNTC1P50748 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.49■□□□□ 0.23
KNTC1P50748 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
KNTC1P50748 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
KNTC1P50748 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KNTC1P50748 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
KNTC1P50748 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
KNTC1P50748 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KNTC1P50748 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
KNTC1P50748 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC16.49■□□□□ 0.23
KNTC1P50748 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KNTC1P50748 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
KNTC1P50748 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
KNTC1P50748 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
KNTC1P50748 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
KNTC1P50748 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
KNTC1P50748 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.49■□□□□ 0.23
KNTC1P50748 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.49■□□□□ 0.23
KNTC1P50748 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
KNTC1P50748 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
KNTC1P50748 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
KNTC1P50748 AL512356.2-201ENST00000546955 174 ntBASIC16.49■□□□□ 0.23
KNTC1P50748 MIR4745-201ENST00000577608 62 ntBASIC16.49■□□□□ 0.23
KNTC1P50748 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
KNTC1P50748 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.49■□□□□ 0.23
KNTC1P50748 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
KNTC1P50748 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.49■□□□□ 0.23
KNTC1P50748 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.49■□□□□ 0.23
KNTC1P50748 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC16.49■□□□□ 0.23
KNTC1P50748 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
KNTC1P50748 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
KNTC1P50748 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
KNTC1P50748 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
KNTC1P50748 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
KNTC1P50748 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.48■□□□□ 0.23
KNTC1P50748 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.48■□□□□ 0.23
KNTC1P50748 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KNTC1P50748 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KNTC1P50748 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
KNTC1P50748 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KNTC1P50748 STK19B-204ENST00000512515 211 ntBASIC16.48■□□□□ 0.23
KNTC1P50748 AC112191.1-201ENST00000523689 701 ntBASIC16.48■□□□□ 0.23
KNTC1P50748 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.48■□□□□ 0.23
KNTC1P50748 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.48■□□□□ 0.23
KNTC1P50748 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC16.48■□□□□ 0.23
KNTC1P50748 AC019129.2-201ENST00000609837 1235 ntBASIC16.48■□□□□ 0.23
KNTC1P50748 AL008721.1-201ENST00000609964 604 ntBASIC16.48■□□□□ 0.23
KNTC1P50748 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.48■□□□□ 0.23
KNTC1P50748 ACTL9-202ENST00000612068 1252 ntBASIC16.48■□□□□ 0.23
KNTC1P50748 AC008761.3-201ENST00000624803 892 ntBASIC16.48■□□□□ 0.23
KNTC1P50748 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KNTC1P50748 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
KNTC1P50748 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
KNTC1P50748 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
KNTC1P50748 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
KNTC1P50748 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KNTC1P50748 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.48■□□□□ 0.23
KNTC1P50748 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
KNTC1P50748 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
KNTC1P50748 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KNTC1P50748 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
KNTC1P50748 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.48■□□□□ 0.23
KNTC1P50748 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC16.48■□□□□ 0.23
KNTC1P50748 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
KNTC1P50748 AC236430.1-201ENST00000402231 743 ntBASIC16.47■□□□□ 0.23
KNTC1P50748 CXCL1P1-201ENST00000502804 216 ntBASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms