Protein–RNA interactions for Protein: P48382

RFX5, DNA-binding protein RFX5, humanhuman

Predicted RBP Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX5P48382 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC21.3■■□□□ 1
RFX5P48382 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
RFX5P48382 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC21.3■■□□□ 1
RFX5P48382 HS6ST1P1-201ENST00000481504 1234 ntBASIC21.3■■□□□ 1
RFX5P48382 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC21.3■■□□□ 1
RFX5P48382 GGTLC5P-201ENST00000617623 998 ntBASIC21.3■■□□□ 1
RFX5P48382 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC21.3■■□□□ 1
RFX5P48382 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC21.3■■□□□ 1
RFX5P48382 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC21.3■■□□□ 1
RFX5P48382 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC21.3■■□□□ 1
RFX5P48382 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RFX5P48382 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RFX5P48382 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
RFX5P48382 MRPL20P1-201ENST00000400819 433 ntBASIC21.29■■□□□ 1
RFX5P48382 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC21.29■■□□□ 1
RFX5P48382 CRYGEP-201ENST00000412192 528 ntBASIC21.29■■□□□ 1
RFX5P48382 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC21.29■■□□□ 1
RFX5P48382 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC21.29■■□□□ 1
RFX5P48382 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC21.29■■□□□ 1
RFX5P48382 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC21.29■■□□□ 1
RFX5P48382 MIR4751-201ENST00000578027 74 ntBASIC21.29■■□□□ 1
RFX5P48382 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RFX5P48382 AC010654.1-201ENST00000615722 808 ntBASIC21.29■■□□□ 1
RFX5P48382 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
RFX5P48382 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC21.29■■□□□ 1
RFX5P48382 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC21.29■■□□□ 1
RFX5P48382 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.29■■□□□ 1
RFX5P48382 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
RFX5P48382 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC21.29■■□□□ 1
RFX5P48382 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
RFX5P48382 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC21.29■■□□□ 1
RFX5P48382 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC21.29■■□□□ 1
RFX5P48382 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RFX5P48382 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC21.28■■□□□ 1
RFX5P48382 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC21.28■■□□□ 1
RFX5P48382 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC21.28■■□□□ 1
RFX5P48382 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RFX5P48382 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC21.28■■□□□ 1
RFX5P48382 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC21.28■■□□□ 1
RFX5P48382 AC087163.2-201ENST00000457299 853 ntBASIC21.28■■□□□ 1
RFX5P48382 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC21.28■■□□□ 1
RFX5P48382 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RFX5P48382 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
RFX5P48382 AC093525.9-201ENST00000624961 1746 ntBASIC21.28■■□□□ 1
RFX5P48382 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RFX5P48382 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
RFX5P48382 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC21.28■■□□□ 1
RFX5P48382 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
RFX5P48382 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC21.28■■□□□ 1
RFX5P48382 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
RFX5P48382 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
RFX5P48382 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RFX5P48382 EGFEM1P-202ENST00000431685 1563 ntBASIC21.27■■□□□ 1
RFX5P48382 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC21.27■■□□□ 1
RFX5P48382 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC21.27■■□□□ 1
RFX5P48382 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC21.27■■□□□ 1
RFX5P48382 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
RFX5P48382 COX10-202ENST00000429152 875 ntTSL 2 BASIC21.27■■□□□ 1
RFX5P48382 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC21.27■■□□□ 1
RFX5P48382 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC21.27■■□□□ 1
RFX5P48382 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC21.27■■□□□ 1
RFX5P48382 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
RFX5P48382 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC21.27■■□□□ 1
RFX5P48382 CYB561-216ENST00000582297 897 ntTSL 3 BASIC21.27■■□□□ 1
RFX5P48382 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RFX5P48382 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC21.27■■□□□ 1
RFX5P48382 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC21.27■■□□□ 1
RFX5P48382 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC21.27■■□□□ 1
RFX5P48382 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RFX5P48382 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RFX5P48382 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC21.27■□□□□ 0.99
RFX5P48382 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
RFX5P48382 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
RFX5P48382 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■□□□□ 0.99
RFX5P48382 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
RFX5P48382 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC21.27■□□□□ 0.99
RFX5P48382 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC21.27■□□□□ 0.99
RFX5P48382 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC21.26■□□□□ 0.99
RFX5P48382 MCC-208ENST00000514701 2855 ntTSL 2 BASIC21.26■□□□□ 0.99
RFX5P48382 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RFX5P48382 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC21.26■□□□□ 0.99
RFX5P48382 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RFX5P48382 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RFX5P48382 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
RFX5P48382 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RFX5P48382 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RFX5P48382 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
RFX5P48382 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC21.26■□□□□ 0.99
RFX5P48382 AC018845.2-201ENST00000568326 409 ntBASIC21.26■□□□□ 0.99
RFX5P48382 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC21.26■□□□□ 0.99
RFX5P48382 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC21.26■□□□□ 0.99
RFX5P48382 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC21.26■□□□□ 0.99
RFX5P48382 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC21.26■□□□□ 0.99
RFX5P48382 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RFX5P48382 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
RFX5P48382 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RFX5P48382 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
RFX5P48382 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RFX5P48382 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
RFX5P48382 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms