Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 RPL28-205ENST00000558131 444 ntTSL 5 BASIC18.2■□□□□ 0.5
MTHFRP42898 MED16-214ENST00000617672 554 ntTSL 5 BASIC18.2■□□□□ 0.5
MTHFRP42898 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
MTHFRP42898 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
MTHFRP42898 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
MTHFRP42898 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
MTHFRP42898 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
MTHFRP42898 AL390961.4-201ENST00000623958 2535 ntBASIC18.2■□□□□ 0.5
MTHFRP42898 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
MTHFRP42898 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
MTHFRP42898 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
MTHFRP42898 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
MTHFRP42898 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
MTHFRP42898 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
MTHFRP42898 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
MTHFRP42898 BX276092.7-203ENST00000637198 1536 ntBASIC18.19■□□□□ 0.5
MTHFRP42898 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
MTHFRP42898 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
MTHFRP42898 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.19■□□□□ 0.5
MTHFRP42898 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
MTHFRP42898 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MTHFRP42898 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
MTHFRP42898 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
MTHFRP42898 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MTHFRP42898 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MTHFRP42898 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MTHFRP42898 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC18.19■□□□□ 0.5
MTHFRP42898 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MTHFRP42898 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC18.19■□□□□ 0.5
MTHFRP42898 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MTHFRP42898 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
MTHFRP42898 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MTHFRP42898 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
MTHFRP42898 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
MTHFRP42898 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC18.19■□□□□ 0.5
MTHFRP42898 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC18.19■□□□□ 0.5
MTHFRP42898 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC18.19■□□□□ 0.5
MTHFRP42898 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC18.19■□□□□ 0.5
MTHFRP42898 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
MTHFRP42898 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
MTHFRP42898 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MTHFRP42898 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
MTHFRP42898 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
MTHFRP42898 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
MTHFRP42898 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.19■□□□□ 0.5
MTHFRP42898 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MTHFRP42898 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.19■□□□□ 0.5
MTHFRP42898 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
MTHFRP42898 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
MTHFRP42898 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
MTHFRP42898 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.18■□□□□ 0.5
MTHFRP42898 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC18.18■□□□□ 0.5
MTHFRP42898 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
MTHFRP42898 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
MTHFRP42898 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
MTHFRP42898 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MTHFRP42898 AC009336.1-201ENST00000608941 1553 ntBASIC18.18■□□□□ 0.5
MTHFRP42898 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MTHFRP42898 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MTHFRP42898 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MTHFRP42898 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
MTHFRP42898 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
MTHFRP42898 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MTHFRP42898 AC018470.1-201ENST00000624790 3129 ntBASIC18.18■□□□□ 0.5
MTHFRP42898 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
MTHFRP42898 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
MTHFRP42898 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
MTHFRP42898 PAWRP1-201ENST00000451083 565 ntBASIC18.18■□□□□ 0.5
MTHFRP42898 AC023141.5-201ENST00000458585 616 ntBASIC18.18■□□□□ 0.5
MTHFRP42898 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
MTHFRP42898 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC18.18■□□□□ 0.5
MTHFRP42898 AL121761.2-201ENST00000598007 1648 ntBASIC18.18■□□□□ 0.5
MTHFRP42898 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.18■□□□□ 0.5
MTHFRP42898 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MTHFRP42898 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MTHFRP42898 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MTHFRP42898 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.18■□□□□ 0.5
MTHFRP42898 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC18.18■□□□□ 0.5
MTHFRP42898 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
MTHFRP42898 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
MTHFRP42898 AC135050.7-201ENST00000624508 2218 ntBASIC18.18■□□□□ 0.5
MTHFRP42898 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MTHFRP42898 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
MTHFRP42898 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
MTHFRP42898 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.18■□□□□ 0.5
MTHFRP42898 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.18■□□□□ 0.5
MTHFRP42898 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.18■□□□□ 0.5
MTHFRP42898 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC18.17■□□□□ 0.5
MTHFRP42898 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.17■□□□□ 0.5
MTHFRP42898 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
MTHFRP42898 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
MTHFRP42898 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.17■□□□□ 0.5
MTHFRP42898 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.17■□□□□ 0.5
MTHFRP42898 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
MTHFRP42898 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
MTHFRP42898 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.17■□□□□ 0.5
MTHFRP42898 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
MTHFRP42898 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC18.17■□□□□ 0.5
MTHFRP42898 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC18.17■□□□□ 0.5
MTHFRP42898 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms