Protein–RNA interactions for Protein: P35716

SOX11, Transcription factor SOX-11, humanhuman

Predictions only

Length 441 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX11P35716 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.1■□□□□ 0.33
SOX11P35716 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SOX11P35716 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.1■□□□□ 0.33
SOX11P35716 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.1■□□□□ 0.33
SOX11P35716 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.1■□□□□ 0.33
SOX11P35716 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC17.1■□□□□ 0.33
SOX11P35716 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
SOX11P35716 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SOX11P35716 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SOX11P35716 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SOX11P35716 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SOX11P35716 KRT18P55-202ENST00000578578 1546 ntBASIC17.1■□□□□ 0.33
SOX11P35716 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SOX11P35716 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SOX11P35716 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SOX11P35716 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
SOX11P35716 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
SOX11P35716 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SOX11P35716 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SOX11P35716 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SOX11P35716 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SOX11P35716 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
SOX11P35716 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.1■□□□□ 0.33
SOX11P35716 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.1■□□□□ 0.33
SOX11P35716 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SOX11P35716 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.1■□□□□ 0.33
SOX11P35716 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SOX11P35716 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.09■□□□□ 0.33
SOX11P35716 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SOX11P35716 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
SOX11P35716 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.09■□□□□ 0.33
SOX11P35716 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SOX11P35716 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
SOX11P35716 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SOX11P35716 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.09■□□□□ 0.33
SOX11P35716 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SOX11P35716 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SOX11P35716 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SOX11P35716 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SOX11P35716 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SOX11P35716 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
SOX11P35716 PVRIG2P-201ENST00000435460 978 ntBASIC17.09■□□□□ 0.33
SOX11P35716 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.09■□□□□ 0.33
SOX11P35716 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
SOX11P35716 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC17.09■□□□□ 0.33
SOX11P35716 AC092329.2-201ENST00000598402 547 ntBASIC17.09■□□□□ 0.33
SOX11P35716 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.09■□□□□ 0.33
SOX11P35716 AC012313.10-201ENST00000623509 926 ntBASIC17.09■□□□□ 0.33
SOX11P35716 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SOX11P35716 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SOX11P35716 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SOX11P35716 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SOX11P35716 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.09■□□□□ 0.33
SOX11P35716 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SOX11P35716 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SOX11P35716 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SOX11P35716 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SOX11P35716 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
SOX11P35716 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.09■□□□□ 0.33
SOX11P35716 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.09■□□□□ 0.33
SOX11P35716 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.09■□□□□ 0.33
SOX11P35716 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SOX11P35716 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SOX11P35716 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SOX11P35716 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
SOX11P35716 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
SOX11P35716 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SOX11P35716 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SOX11P35716 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SOX11P35716 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.08■□□□□ 0.33
SOX11P35716 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
SOX11P35716 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.08■□□□□ 0.33
SOX11P35716 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
SOX11P35716 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
SOX11P35716 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SOX11P35716 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SOX11P35716 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SOX11P35716 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
SOX11P35716 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SOX11P35716 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SOX11P35716 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
SOX11P35716 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SOX11P35716 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SOX11P35716 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SOX11P35716 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SOX11P35716 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SOX11P35716 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SOX11P35716 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SOX11P35716 CHCHD2P8-201ENST00000429873 447 ntBASIC17.08■□□□□ 0.32
SOX11P35716 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SOX11P35716 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SOX11P35716 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SOX11P35716 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.08■□□□□ 0.32
SOX11P35716 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.08■□□□□ 0.32
SOX11P35716 RNF126P1-202ENST00000569893 925 ntBASIC17.08■□□□□ 0.32
SOX11P35716 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SOX11P35716 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
SOX11P35716 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
SOX11P35716 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SOX11P35716 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms