Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTPN6P29350 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PTPN6P29350 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.56■□□□□ 0.24
PTPN6P29350 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.56■□□□□ 0.24
PTPN6P29350 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
PTPN6P29350 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN6P29350 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN6P29350 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN6P29350 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN6P29350 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN6P29350 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN6P29350 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
PTPN6P29350 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN6P29350 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
PTPN6P29350 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN6P29350 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN6P29350 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN6P29350 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN6P29350 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN6P29350 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN6P29350 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN6P29350 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN6P29350 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN6P29350 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN6P29350 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN6P29350 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
PTPN6P29350 COX5BP2-201ENST00000392354 334 ntBASIC16.55■□□□□ 0.24
PTPN6P29350 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN6P29350 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC16.55■□□□□ 0.24
PTPN6P29350 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.55■□□□□ 0.24
PTPN6P29350 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN6P29350 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.55■□□□□ 0.24
PTPN6P29350 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN6P29350 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.55■□□□□ 0.24
PTPN6P29350 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.55■□□□□ 0.24
PTPN6P29350 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN6P29350 LINC02012-201ENST00000608206 1725 ntBASIC16.55■□□□□ 0.24
PTPN6P29350 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.55■□□□□ 0.24
PTPN6P29350 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN6P29350 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN6P29350 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
PTPN6P29350 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
PTPN6P29350 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN6P29350 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN6P29350 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN6P29350 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN6P29350 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.55■□□□□ 0.24
PTPN6P29350 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN6P29350 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN6P29350 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.55■□□□□ 0.24
PTPN6P29350 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
PTPN6P29350 AC105020.1-201ENST00000435356 2205 ntBASIC16.54■□□□□ 0.24
PTPN6P29350 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.54■□□□□ 0.24
PTPN6P29350 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.54■□□□□ 0.24
PTPN6P29350 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PTPN6P29350 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTPN6P29350 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PTPN6P29350 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTPN6P29350 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTPN6P29350 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PTPN6P29350 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
PTPN6P29350 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.54■□□□□ 0.24
PTPN6P29350 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC16.54■□□□□ 0.24
PTPN6P29350 AP002383.4-201ENST00000442518 975 ntBASIC16.54■□□□□ 0.24
PTPN6P29350 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC16.54■□□□□ 0.24
PTPN6P29350 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTPN6P29350 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
PTPN6P29350 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTPN6P29350 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
PTPN6P29350 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.54■□□□□ 0.24
PTPN6P29350 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTPN6P29350 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
PTPN6P29350 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTPN6P29350 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
PTPN6P29350 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.54■□□□□ 0.24
PTPN6P29350 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PTPN6P29350 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTPN6P29350 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.54■□□□□ 0.24
PTPN6P29350 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PTPN6P29350 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN6P29350 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN6P29350 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN6P29350 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN6P29350 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.53■□□□□ 0.24
PTPN6P29350 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN6P29350 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN6P29350 AC092053.1-201ENST00000605787 1936 ntBASIC16.53■□□□□ 0.24
PTPN6P29350 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN6P29350 FLJ38576-201ENST00000623820 2459 ntBASIC16.53■□□□□ 0.24
PTPN6P29350 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN6P29350 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN6P29350 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN6P29350 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN6P29350 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.53■□□□□ 0.24
PTPN6P29350 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN6P29350 HCG4P8-203ENST00000443049 980 ntBASIC16.53■□□□□ 0.24
PTPN6P29350 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.53■□□□□ 0.24
PTPN6P29350 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.53■□□□□ 0.24
PTPN6P29350 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.53■□□□□ 0.24
PTPN6P29350 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms