Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
VCLP18206 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VCLP18206 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VCLP18206 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
VCLP18206 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
VCLP18206 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VCLP18206 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.59■□□□□ 0.41
VCLP18206 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
VCLP18206 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
VCLP18206 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
VCLP18206 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
VCLP18206 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
VCLP18206 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
VCLP18206 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
VCLP18206 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
VCLP18206 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
VCLP18206 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.58■□□□□ 0.41
VCLP18206 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.58■□□□□ 0.41
VCLP18206 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
VCLP18206 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VCLP18206 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VCLP18206 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
VCLP18206 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VCLP18206 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VCLP18206 POM121L3P-201ENST00000419331 1163 ntBASIC17.58■□□□□ 0.4
VCLP18206 AL845331.1-201ENST00000424978 1190 ntBASIC17.58■□□□□ 0.4
VCLP18206 IGHV3-47-201ENST00000425060 335 ntBASIC17.58■□□□□ 0.4
VCLP18206 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
VCLP18206 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.58■□□□□ 0.4
VCLP18206 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.58■□□□□ 0.4
VCLP18206 AC009533.2-201ENST00000543664 586 ntBASIC17.58■□□□□ 0.4
VCLP18206 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.58■□□□□ 0.4
VCLP18206 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.58■□□□□ 0.4
VCLP18206 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VCLP18206 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
VCLP18206 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
VCLP18206 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.58■□□□□ 0.4
VCLP18206 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.58■□□□□ 0.4
VCLP18206 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
VCLP18206 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VCLP18206 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.58■□□□□ 0.4
VCLP18206 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.58■□□□□ 0.4
VCLP18206 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VCLP18206 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
VCLP18206 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
VCLP18206 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.58■□□□□ 0.4
VCLP18206 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
VCLP18206 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
VCLP18206 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
VCLP18206 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VCLP18206 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
VCLP18206 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.57■□□□□ 0.4
VCLP18206 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VCLP18206 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
VCLP18206 AC100803.2-201ENST00000562459 1963 ntBASIC17.57■□□□□ 0.4
VCLP18206 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
VCLP18206 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
VCLP18206 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
VCLP18206 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VCLP18206 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VCLP18206 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
VCLP18206 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VCLP18206 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
VCLP18206 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
VCLP18206 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.57■□□□□ 0.4
VCLP18206 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.57■□□□□ 0.4
VCLP18206 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.57■□□□□ 0.4
VCLP18206 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.57■□□□□ 0.4
VCLP18206 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.57■□□□□ 0.4
VCLP18206 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.57■□□□□ 0.4
VCLP18206 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.57■□□□□ 0.4
VCLP18206 AC138894.3-201ENST00000603787 634 ntBASIC17.57■□□□□ 0.4
VCLP18206 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VCLP18206 AL691432.3-201ENST00000621860 400 ntBASIC17.57■□□□□ 0.4
VCLP18206 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VCLP18206 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
VCLP18206 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
VCLP18206 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.57■□□□□ 0.4
VCLP18206 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
VCLP18206 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
VCLP18206 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VCLP18206 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
VCLP18206 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VCLP18206 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VCLP18206 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
VCLP18206 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.57■□□□□ 0.4
VCLP18206 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
VCLP18206 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.57■□□□□ 0.4
VCLP18206 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.57■□□□□ 0.4
VCLP18206 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
VCLP18206 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
VCLP18206 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
VCLP18206 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
VCLP18206 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VCLP18206 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
VCLP18206 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VCLP18206 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.56■□□□□ 0.4
VCLP18206 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
VCLP18206 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
VCLP18206 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms