Protein–RNA interactions for Protein: P17655

CAPN2, Calpain-2 catalytic subunit, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN2P17655 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC20.08■□□□□ 0.8
CAPN2P17655 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.8
CAPN2P17655 HTR7P1-202ENST00000624664 4411 ntBASIC20.08■□□□□ 0.8
CAPN2P17655 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
CAPN2P17655 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CAPN2P17655 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CAPN2P17655 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC20.08■□□□□ 0.8
CAPN2P17655 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
CAPN2P17655 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.08■□□□□ 0.8
CAPN2P17655 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC20.07■□□□□ 0.8
CAPN2P17655 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC20.07■□□□□ 0.8
CAPN2P17655 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CAPN2P17655 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CAPN2P17655 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CAPN2P17655 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CAPN2P17655 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CAPN2P17655 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CAPN2P17655 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CAPN2P17655 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CAPN2P17655 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
CAPN2P17655 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CAPN2P17655 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC20.07■□□□□ 0.8
CAPN2P17655 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC20.07■□□□□ 0.8
CAPN2P17655 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC20.07■□□□□ 0.8
CAPN2P17655 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC20.07■□□□□ 0.8
CAPN2P17655 GREM1-201ENST00000560677 623 ntTSL 4 BASIC20.07■□□□□ 0.8
CAPN2P17655 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC20.07■□□□□ 0.8
CAPN2P17655 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CAPN2P17655 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC20.07■□□□□ 0.8
CAPN2P17655 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CAPN2P17655 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CAPN2P17655 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CAPN2P17655 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CAPN2P17655 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CAPN2P17655 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC20.07■□□□□ 0.8
CAPN2P17655 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CAPN2P17655 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC20.07■□□□□ 0.8
CAPN2P17655 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC20.07■□□□□ 0.8
CAPN2P17655 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CAPN2P17655 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CAPN2P17655 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CAPN2P17655 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC20.06■□□□□ 0.8
CAPN2P17655 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC20.06■□□□□ 0.8
CAPN2P17655 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
CAPN2P17655 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CAPN2P17655 EFTUD1P1-204ENST00000560401 1798 ntBASIC20.06■□□□□ 0.8
CAPN2P17655 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
CAPN2P17655 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CAPN2P17655 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CAPN2P17655 ATP6V0CP3-201ENST00000417255 467 ntBASIC20.06■□□□□ 0.8
CAPN2P17655 ALG1L5P-201ENST00000482043 771 ntBASIC20.06■□□□□ 0.8
CAPN2P17655 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
CAPN2P17655 AC190387.1-201ENST00000551683 408 ntBASIC20.06■□□□□ 0.8
CAPN2P17655 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC20.06■□□□□ 0.8
CAPN2P17655 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC20.06■□□□□ 0.8
CAPN2P17655 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
CAPN2P17655 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CAPN2P17655 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC20.06■□□□□ 0.8
CAPN2P17655 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CAPN2P17655 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC20.05■□□□□ 0.8
CAPN2P17655 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CAPN2P17655 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC20.05■□□□□ 0.8
CAPN2P17655 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CAPN2P17655 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CAPN2P17655 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CAPN2P17655 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CAPN2P17655 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CAPN2P17655 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CAPN2P17655 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.05■□□□□ 0.8
CAPN2P17655 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC20.05■□□□□ 0.8
CAPN2P17655 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC20.05■□□□□ 0.8
CAPN2P17655 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CAPN2P17655 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC20.05■□□□□ 0.8
CAPN2P17655 DDX43P3-201ENST00000441064 443 ntBASIC20.05■□□□□ 0.8
CAPN2P17655 BCRP1-201ENST00000444246 691 ntBASIC20.05■□□□□ 0.8
CAPN2P17655 CEND1P1-201ENST00000451006 455 ntBASIC20.05■□□□□ 0.8
CAPN2P17655 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC20.05■□□□□ 0.8
CAPN2P17655 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
CAPN2P17655 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CAPN2P17655 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC20.05■□□□□ 0.8
CAPN2P17655 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC20.05■□□□□ 0.8
CAPN2P17655 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CAPN2P17655 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
CAPN2P17655 HEIH-201ENST00000623091 1652 ntBASIC20.05■□□□□ 0.8
CAPN2P17655 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CAPN2P17655 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CAPN2P17655 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
CAPN2P17655 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC20.05■□□□□ 0.8
CAPN2P17655 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
CAPN2P17655 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CAPN2P17655 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CAPN2P17655 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC20.05■□□□□ 0.8
CAPN2P17655 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
CAPN2P17655 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC20.05■□□□□ 0.8
CAPN2P17655 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CAPN2P17655 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
CAPN2P17655 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC20.04■□□□□ 0.8
CAPN2P17655 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CAPN2P17655 PMPCAP1-201ENST00000508114 1576 ntBASIC20.04■□□□□ 0.8
CAPN2P17655 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms