Protein–RNA interactions for Protein: P04350

TUBB4A, Tubulin beta-4A chain, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4AP04350 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
TUBB4AP04350 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TUBB4AP04350 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TUBB4AP04350 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
TUBB4AP04350 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
TUBB4AP04350 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
TUBB4AP04350 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TUBB4AP04350 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC18.71■□□□□ 0.59
TUBB4AP04350 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TUBB4AP04350 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC18.71■□□□□ 0.59
TUBB4AP04350 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
TUBB4AP04350 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.71■□□□□ 0.59
TUBB4AP04350 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TUBB4AP04350 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TUBB4AP04350 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.71■□□□□ 0.59
TUBB4AP04350 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.71■□□□□ 0.59
TUBB4AP04350 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
TUBB4AP04350 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.71■□□□□ 0.59
TUBB4AP04350 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TUBB4AP04350 AP003097.1-201ENST00000530657 1135 ntBASIC18.71■□□□□ 0.59
TUBB4AP04350 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TUBB4AP04350 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TUBB4AP04350 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TUBB4AP04350 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TUBB4AP04350 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TUBB4AP04350 MTHFR-217ENST00000641820 1569 ntBASIC18.71■□□□□ 0.59
TUBB4AP04350 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TUBB4AP04350 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TUBB4AP04350 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
TUBB4AP04350 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TUBB4AP04350 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TUBB4AP04350 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC18.71■□□□□ 0.59
TUBB4AP04350 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC18.71■□□□□ 0.59
TUBB4AP04350 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TUBB4AP04350 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC18.71■□□□□ 0.59
TUBB4AP04350 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
TUBB4AP04350 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC18.7■□□□□ 0.58
TUBB4AP04350 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
TUBB4AP04350 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.7■□□□□ 0.58
TUBB4AP04350 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TUBB4AP04350 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TUBB4AP04350 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
TUBB4AP04350 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TUBB4AP04350 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
TUBB4AP04350 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC18.7■□□□□ 0.58
TUBB4AP04350 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TUBB4AP04350 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TUBB4AP04350 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
TUBB4AP04350 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TUBB4AP04350 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TUBB4AP04350 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
TUBB4AP04350 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TUBB4AP04350 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.7■□□□□ 0.58
TUBB4AP04350 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
TUBB4AP04350 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.7■□□□□ 0.58
TUBB4AP04350 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.7■□□□□ 0.58
TUBB4AP04350 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC18.7■□□□□ 0.58
TUBB4AP04350 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.7■□□□□ 0.58
TUBB4AP04350 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
TUBB4AP04350 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TUBB4AP04350 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC18.7■□□□□ 0.58
TUBB4AP04350 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TUBB4AP04350 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TUBB4AP04350 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
TUBB4AP04350 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TUBB4AP04350 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TUBB4AP04350 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TUBB4AP04350 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
TUBB4AP04350 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TUBB4AP04350 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
TUBB4AP04350 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
TUBB4AP04350 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC18.7■□□□□ 0.58
TUBB4AP04350 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TUBB4AP04350 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC18.7■□□□□ 0.58
TUBB4AP04350 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC18.7■□□□□ 0.58
TUBB4AP04350 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TUBB4AP04350 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC18.69■□□□□ 0.58
TUBB4AP04350 AC005052.1-201ENST00000625181 2492 ntBASIC18.69■□□□□ 0.58
TUBB4AP04350 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TUBB4AP04350 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TUBB4AP04350 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TUBB4AP04350 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.69■□□□□ 0.58
TUBB4AP04350 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TUBB4AP04350 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC18.69■□□□□ 0.58
TUBB4AP04350 AC024909.3-201ENST00000611513 2257 ntBASIC18.69■□□□□ 0.58
TUBB4AP04350 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
TUBB4AP04350 ESRRAP1-201ENST00000400596 1257 ntBASIC18.69■□□□□ 0.58
TUBB4AP04350 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.69■□□□□ 0.58
TUBB4AP04350 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TUBB4AP04350 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.69■□□□□ 0.58
TUBB4AP04350 AP002490.2-201ENST00000524791 560 ntBASIC18.69■□□□□ 0.58
TUBB4AP04350 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.69■□□□□ 0.58
TUBB4AP04350 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.69■□□□□ 0.58
TUBB4AP04350 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.69■□□□□ 0.58
TUBB4AP04350 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TUBB4AP04350 ITM2C-210ENST00000620962 501 ntBASIC18.69■□□□□ 0.58
TUBB4AP04350 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TUBB4AP04350 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TUBB4AP04350 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TUBB4AP04350 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms