Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CPNE6O95741 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.14■□□□□ 0.33
CPNE6O95741 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
CPNE6O95741 CAND2-206ENST00000626378 333 ntTSL 5 BASIC17.14■□□□□ 0.33
CPNE6O95741 AP000867.4-201ENST00000641616 219 ntBASIC17.14■□□□□ 0.33
CPNE6O95741 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.14■□□□□ 0.33
CPNE6O95741 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE6O95741 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE6O95741 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE6O95741 AC022898.2-201ENST00000616822 1312 ntBASIC17.14■□□□□ 0.33
CPNE6O95741 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.14■□□□□ 0.33
CPNE6O95741 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE6O95741 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.14■□□□□ 0.33
CPNE6O95741 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.14■□□□□ 0.33
CPNE6O95741 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE6O95741 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE6O95741 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.14■□□□□ 0.33
CPNE6O95741 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CPNE6O95741 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.14■□□□□ 0.33
CPNE6O95741 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CPNE6O95741 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPNE6O95741 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
CPNE6O95741 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPNE6O95741 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CPNE6O95741 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CPNE6O95741 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.13■□□□□ 0.33
CPNE6O95741 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPNE6O95741 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPNE6O95741 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPNE6O95741 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.13■□□□□ 0.33
CPNE6O95741 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.13■□□□□ 0.33
CPNE6O95741 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CPNE6O95741 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CPNE6O95741 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC17.13■□□□□ 0.33
CPNE6O95741 KRT18P13-201ENST00000400056 1290 ntBASIC17.13■□□□□ 0.33
CPNE6O95741 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.13■□□□□ 0.33
CPNE6O95741 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC17.13■□□□□ 0.33
CPNE6O95741 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.13■□□□□ 0.33
CPNE6O95741 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC17.13■□□□□ 0.33
CPNE6O95741 NKAPP1-205ENST00000585790 367 ntBASIC17.13■□□□□ 0.33
CPNE6O95741 TERC-201ENST00000602385 541 ntBASIC17.13■□□□□ 0.33
CPNE6O95741 AC025062.2-201ENST00000605477 670 ntBASIC17.13■□□□□ 0.33
CPNE6O95741 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.13■□□□□ 0.33
CPNE6O95741 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPNE6O95741 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CPNE6O95741 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPNE6O95741 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPNE6O95741 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CPNE6O95741 AC093010.1-201ENST00000473625 1624 ntBASIC17.13■□□□□ 0.33
CPNE6O95741 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPNE6O95741 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
CPNE6O95741 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CPNE6O95741 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPNE6O95741 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CPNE6O95741 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE6O95741 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CPNE6O95741 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE6O95741 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE6O95741 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.12■□□□□ 0.33
CPNE6O95741 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.12■□□□□ 0.33
CPNE6O95741 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CPNE6O95741 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE6O95741 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.12■□□□□ 0.33
CPNE6O95741 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE6O95741 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE6O95741 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE6O95741 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE6O95741 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE6O95741 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE6O95741 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE6O95741 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE6O95741 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.12■□□□□ 0.33
CPNE6O95741 POLD2P1-201ENST00000511220 997 ntBASIC17.12■□□□□ 0.33
CPNE6O95741 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.12■□□□□ 0.33
CPNE6O95741 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.12■□□□□ 0.33
CPNE6O95741 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.12■□□□□ 0.33
CPNE6O95741 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE6O95741 MTDHP4-201ENST00000600287 670 ntBASIC17.12■□□□□ 0.33
CPNE6O95741 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE6O95741 PMS2P7-201ENST00000506558 1336 ntBASIC17.12■□□□□ 0.33
CPNE6O95741 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CPNE6O95741 PHGDH-209ENST00000641074 1780 ntBASIC17.12■□□□□ 0.33
CPNE6O95741 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE6O95741 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.12■□□□□ 0.33
CPNE6O95741 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE6O95741 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE6O95741 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.12■□□□□ 0.33
CPNE6O95741 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CPNE6O95741 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.12■□□□□ 0.33
CPNE6O95741 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.12■□□□□ 0.33
CPNE6O95741 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CPNE6O95741 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
CPNE6O95741 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.11■□□□□ 0.33
CPNE6O95741 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.11■□□□□ 0.33
CPNE6O95741 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CPNE6O95741 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CPNE6O95741 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CPNE6O95741 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CPNE6O95741 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CPNE6O95741 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms