Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RFPL1O75677 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RFPL1O75677 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.52■□□□□ 0.4
RFPL1O75677 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.52■□□□□ 0.4
RFPL1O75677 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.52■□□□□ 0.4
RFPL1O75677 HLA-F-220ENST00000434407 884 ntBASIC17.52■□□□□ 0.4
RFPL1O75677 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.52■□□□□ 0.4
RFPL1O75677 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.52■□□□□ 0.4
RFPL1O75677 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RFPL1O75677 AC092329.2-201ENST00000598402 547 ntBASIC17.52■□□□□ 0.4
RFPL1O75677 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RFPL1O75677 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC17.52■□□□□ 0.4
RFPL1O75677 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
RFPL1O75677 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC17.52■□□□□ 0.4
RFPL1O75677 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.52■□□□□ 0.4
RFPL1O75677 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
RFPL1O75677 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
RFPL1O75677 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RFPL1O75677 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.52■□□□□ 0.39
RFPL1O75677 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RFPL1O75677 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC17.52■□□□□ 0.39
RFPL1O75677 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
RFPL1O75677 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.51■□□□□ 0.39
RFPL1O75677 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RFPL1O75677 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RFPL1O75677 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
RFPL1O75677 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RFPL1O75677 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RFPL1O75677 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RFPL1O75677 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RFPL1O75677 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RFPL1O75677 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RFPL1O75677 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RFPL1O75677 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.51■□□□□ 0.39
RFPL1O75677 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC17.51■□□□□ 0.39
RFPL1O75677 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.51■□□□□ 0.39
RFPL1O75677 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
RFPL1O75677 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.51■□□□□ 0.39
RFPL1O75677 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.51■□□□□ 0.39
RFPL1O75677 SDHD-206ENST00000528182 754 ntTSL 3 BASIC17.51■□□□□ 0.39
RFPL1O75677 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.51■□□□□ 0.39
RFPL1O75677 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RFPL1O75677 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.51■□□□□ 0.39
RFPL1O75677 LINC02012-201ENST00000608206 1725 ntBASIC17.51■□□□□ 0.39
RFPL1O75677 AL121672.3-201ENST00000608644 468 ntBASIC17.51■□□□□ 0.39
RFPL1O75677 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
RFPL1O75677 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RFPL1O75677 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
RFPL1O75677 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
RFPL1O75677 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
RFPL1O75677 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.51■□□□□ 0.39
RFPL1O75677 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RFPL1O75677 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
RFPL1O75677 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
RFPL1O75677 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RFPL1O75677 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RFPL1O75677 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RFPL1O75677 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.5■□□□□ 0.39
RFPL1O75677 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RFPL1O75677 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.5■□□□□ 0.39
RFPL1O75677 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.5■□□□□ 0.39
RFPL1O75677 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RFPL1O75677 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RFPL1O75677 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RFPL1O75677 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.5■□□□□ 0.39
RFPL1O75677 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.5■□□□□ 0.39
RFPL1O75677 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RFPL1O75677 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
RFPL1O75677 TSSC2-201ENST00000450217 709 ntBASIC17.5■□□□□ 0.39
RFPL1O75677 BX276092.5-203ENST00000456199 560 ntBASIC17.5■□□□□ 0.39
RFPL1O75677 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.5■□□□□ 0.39
RFPL1O75677 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.5■□□□□ 0.39
RFPL1O75677 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RFPL1O75677 AC111152.3-201ENST00000569699 673 ntBASIC17.5■□□□□ 0.39
RFPL1O75677 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RFPL1O75677 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RFPL1O75677 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
RFPL1O75677 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RFPL1O75677 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
RFPL1O75677 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
RFPL1O75677 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RFPL1O75677 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RFPL1O75677 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RFPL1O75677 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC17.5■□□□□ 0.39
RFPL1O75677 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.5■□□□□ 0.39
RFPL1O75677 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RFPL1O75677 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RFPL1O75677 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
RFPL1O75677 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RFPL1O75677 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
RFPL1O75677 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RFPL1O75677 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.49■□□□□ 0.39
RFPL1O75677 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RFPL1O75677 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RFPL1O75677 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
RFPL1O75677 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC17.49■□□□□ 0.39
RFPL1O75677 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.49■□□□□ 0.39
RFPL1O75677 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RFPL1O75677 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RFPL1O75677 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms