Protein–RNA interactions for Protein: O00458

IFRD1, Interferon-related developmental regulator 1, humanhuman

Predicted RBP Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFRD1O00458 AC141586.5-201ENST00000624546 2050 ntBASIC17.26■□□□□ 0.35
IFRD1O00458 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
IFRD1O00458 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.26■□□□□ 0.35
IFRD1O00458 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
IFRD1O00458 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
IFRD1O00458 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC17.26■□□□□ 0.35
IFRD1O00458 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
IFRD1O00458 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.26■□□□□ 0.35
IFRD1O00458 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.26■□□□□ 0.35
IFRD1O00458 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.26■□□□□ 0.35
IFRD1O00458 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
IFRD1O00458 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
IFRD1O00458 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
IFRD1O00458 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.26■□□□□ 0.35
IFRD1O00458 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
IFRD1O00458 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
IFRD1O00458 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
IFRD1O00458 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
IFRD1O00458 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
IFRD1O00458 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.26■□□□□ 0.35
IFRD1O00458 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
IFRD1O00458 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.26■□□□□ 0.35
IFRD1O00458 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.26■□□□□ 0.35
IFRD1O00458 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.26■□□□□ 0.35
IFRD1O00458 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
IFRD1O00458 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
IFRD1O00458 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
IFRD1O00458 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
IFRD1O00458 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IFRD1O00458 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
IFRD1O00458 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
IFRD1O00458 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.25■□□□□ 0.35
IFRD1O00458 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IFRD1O00458 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
IFRD1O00458 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IFRD1O00458 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
IFRD1O00458 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
IFRD1O00458 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
IFRD1O00458 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IFRD1O00458 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IFRD1O00458 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
IFRD1O00458 SRP19-202ENST00000445150 833 ntTSL 2 BASIC17.25■□□□□ 0.35
IFRD1O00458 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
IFRD1O00458 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.25■□□□□ 0.35
IFRD1O00458 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.25■□□□□ 0.35
IFRD1O00458 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.25■□□□□ 0.35
IFRD1O00458 AC133963.1-201ENST00000504166 1679 ntBASIC17.25■□□□□ 0.35
IFRD1O00458 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
IFRD1O00458 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IFRD1O00458 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.25■□□□□ 0.35
IFRD1O00458 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
IFRD1O00458 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
IFRD1O00458 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
IFRD1O00458 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IFRD1O00458 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IFRD1O00458 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC17.24■□□□□ 0.35
IFRD1O00458 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
IFRD1O00458 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
IFRD1O00458 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.24■□□□□ 0.35
IFRD1O00458 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IFRD1O00458 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IFRD1O00458 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.24■□□□□ 0.35
IFRD1O00458 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.24■□□□□ 0.35
IFRD1O00458 AC132008.2-207ENST00000454517 770 ntBASIC17.24■□□□□ 0.35
IFRD1O00458 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
IFRD1O00458 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.24■□□□□ 0.35
IFRD1O00458 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
IFRD1O00458 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IFRD1O00458 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
IFRD1O00458 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.24■□□□□ 0.35
IFRD1O00458 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
IFRD1O00458 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
IFRD1O00458 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
IFRD1O00458 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
IFRD1O00458 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IFRD1O00458 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.24■□□□□ 0.35
IFRD1O00458 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.24■□□□□ 0.35
IFRD1O00458 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IFRD1O00458 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
IFRD1O00458 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IFRD1O00458 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
IFRD1O00458 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
IFRD1O00458 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
IFRD1O00458 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
IFRD1O00458 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
IFRD1O00458 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
IFRD1O00458 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.23■□□□□ 0.35
IFRD1O00458 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
IFRD1O00458 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
IFRD1O00458 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IFRD1O00458 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.23■□□□□ 0.35
IFRD1O00458 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
IFRD1O00458 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
IFRD1O00458 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.23■□□□□ 0.35
IFRD1O00458 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
IFRD1O00458 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.23■□□□□ 0.35
IFRD1O00458 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
IFRD1O00458 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
IFRD1O00458 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
IFRD1O00458 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms