Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC13.38□□□□□ -0.27
COLCA2A8K830 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC13.38□□□□□ -0.27
COLCA2A8K830 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
COLCA2A8K830 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC13.38□□□□□ -0.27
COLCA2A8K830 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
COLCA2A8K830 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
COLCA2A8K830 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
COLCA2A8K830 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
COLCA2A8K830 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
COLCA2A8K830 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC13.38□□□□□ -0.27
COLCA2A8K830 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
COLCA2A8K830 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC13.38□□□□□ -0.27
COLCA2A8K830 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
COLCA2A8K830 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC13.37□□□□□ -0.27
COLCA2A8K830 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
COLCA2A8K830 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
COLCA2A8K830 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
COLCA2A8K830 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
COLCA2A8K830 AC004817.3-201ENST00000602957 2129 ntBASIC13.37□□□□□ -0.27
COLCA2A8K830 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
COLCA2A8K830 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.37□□□□□ -0.27
COLCA2A8K830 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC13.37□□□□□ -0.27
COLCA2A8K830 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
COLCA2A8K830 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
COLCA2A8K830 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC13.37□□□□□ -0.27
COLCA2A8K830 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC13.37□□□□□ -0.27
COLCA2A8K830 AC006486.2-201ENST00000624246 2199 ntBASIC13.37□□□□□ -0.27
COLCA2A8K830 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
COLCA2A8K830 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
COLCA2A8K830 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
COLCA2A8K830 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
COLCA2A8K830 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
COLCA2A8K830 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
COLCA2A8K830 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC13.37□□□□□ -0.27
COLCA2A8K830 TUBB8P6-201ENST00000436895 1288 ntBASIC13.37□□□□□ -0.27
COLCA2A8K830 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
COLCA2A8K830 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC13.37□□□□□ -0.27
COLCA2A8K830 PVT1-219ENST00000523427 938 ntTSL 3 BASIC13.37□□□□□ -0.27
COLCA2A8K830 AL162412.1-201ENST00000567129 965 ntBASIC13.37□□□□□ -0.27
COLCA2A8K830 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC13.37□□□□□ -0.27
COLCA2A8K830 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC13.37□□□□□ -0.27
COLCA2A8K830 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
COLCA2A8K830 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
COLCA2A8K830 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
COLCA2A8K830 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC13.37□□□□□ -0.27
COLCA2A8K830 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
COLCA2A8K830 LCK-206ENST00000373564 2137 ntTSL 5 BASIC13.37□□□□□ -0.27
COLCA2A8K830 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
COLCA2A8K830 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
COLCA2A8K830 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
COLCA2A8K830 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
COLCA2A8K830 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
COLCA2A8K830 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
COLCA2A8K830 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC13.37□□□□□ -0.27
COLCA2A8K830 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
COLCA2A8K830 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
COLCA2A8K830 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
COLCA2A8K830 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
COLCA2A8K830 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC13.37□□□□□ -0.27
COLCA2A8K830 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
COLCA2A8K830 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
COLCA2A8K830 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
COLCA2A8K830 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
COLCA2A8K830 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
COLCA2A8K830 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
COLCA2A8K830 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
COLCA2A8K830 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
COLCA2A8K830 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
COLCA2A8K830 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
COLCA2A8K830 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
COLCA2A8K830 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
COLCA2A8K830 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
COLCA2A8K830 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC13.36□□□□□ -0.27
COLCA2A8K830 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.36□□□□□ -0.27
COLCA2A8K830 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
COLCA2A8K830 NT5C3AP1-201ENST00000394500 1012 ntBASIC13.36□□□□□ -0.27
COLCA2A8K830 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC13.36□□□□□ -0.27
COLCA2A8K830 MIR4767-201ENST00000582827 78 ntBASIC13.36□□□□□ -0.27
COLCA2A8K830 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
COLCA2A8K830 MPST-208ENST00000628507 698 ntTSL 5 BASIC13.36□□□□□ -0.27
COLCA2A8K830 GCK-202ENST00000345378 2421 ntTSL 2 BASIC13.36□□□□□ -0.27
COLCA2A8K830 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
COLCA2A8K830 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC13.36□□□□□ -0.27
COLCA2A8K830 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
COLCA2A8K830 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
COLCA2A8K830 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
COLCA2A8K830 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
COLCA2A8K830 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
COLCA2A8K830 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.36□□□□□ -0.27
COLCA2A8K830 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
COLCA2A8K830 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
COLCA2A8K830 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.36□□□□□ -0.27
COLCA2A8K830 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
COLCA2A8K830 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
COLCA2A8K830 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC13.36□□□□□ -0.27
COLCA2A8K830 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC13.36□□□□□ -0.27
COLCA2A8K830 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
COLCA2A8K830 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
COLCA2A8K830 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
COLCA2A8K830 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms