Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV5-4A0A0C4DH59 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV5-4A0A0C4DH59 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV5-4A0A0C4DH59 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TRBV5-4A0A0C4DH59 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV5-4A0A0C4DH59 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV5-4A0A0C4DH59 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV5-4A0A0C4DH59 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.12■□□□□ 0.33
TRBV5-4A0A0C4DH59 HIST2H3DP1-201ENST00000401004 416 ntBASIC17.12■□□□□ 0.33
TRBV5-4A0A0C4DH59 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.12■□□□□ 0.33
TRBV5-4A0A0C4DH59 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.12■□□□□ 0.33
TRBV5-4A0A0C4DH59 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.12■□□□□ 0.33
TRBV5-4A0A0C4DH59 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
TRBV5-4A0A0C4DH59 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV5-4A0A0C4DH59 AC064862.7-201ENST00000604520 867 ntBASIC17.12■□□□□ 0.33
TRBV5-4A0A0C4DH59 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
TRBV5-4A0A0C4DH59 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.12■□□□□ 0.33
TRBV5-4A0A0C4DH59 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TRBV5-4A0A0C4DH59 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
TRBV5-4A0A0C4DH59 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.12■□□□□ 0.33
TRBV5-4A0A0C4DH59 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV5-4A0A0C4DH59 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV5-4A0A0C4DH59 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV5-4A0A0C4DH59 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
TRBV5-4A0A0C4DH59 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV5-4A0A0C4DH59 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV5-4A0A0C4DH59 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TRBV5-4A0A0C4DH59 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV5-4A0A0C4DH59 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV5-4A0A0C4DH59 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV5-4A0A0C4DH59 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV5-4A0A0C4DH59 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV5-4A0A0C4DH59 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV5-4A0A0C4DH59 AC004870.1-201ENST00000315132 882 ntBASIC17.11■□□□□ 0.33
TRBV5-4A0A0C4DH59 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV5-4A0A0C4DH59 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV5-4A0A0C4DH59 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV5-4A0A0C4DH59 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.11■□□□□ 0.33
TRBV5-4A0A0C4DH59 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.11■□□□□ 0.33
TRBV5-4A0A0C4DH59 AC079781.3-201ENST00000449110 356 ntBASIC17.11■□□□□ 0.33
TRBV5-4A0A0C4DH59 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.11■□□□□ 0.33
TRBV5-4A0A0C4DH59 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.11■□□□□ 0.33
TRBV5-4A0A0C4DH59 AC104692.2-201ENST00000603054 253 ntBASIC17.11■□□□□ 0.33
TRBV5-4A0A0C4DH59 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC17.11■□□□□ 0.33
TRBV5-4A0A0C4DH59 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TRBV5-4A0A0C4DH59 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
TRBV5-4A0A0C4DH59 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.11■□□□□ 0.33
TRBV5-4A0A0C4DH59 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV5-4A0A0C4DH59 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.11■□□□□ 0.33
TRBV5-4A0A0C4DH59 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV5-4A0A0C4DH59 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV5-4A0A0C4DH59 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV5-4A0A0C4DH59 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV5-4A0A0C4DH59 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV5-4A0A0C4DH59 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV5-4A0A0C4DH59 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV5-4A0A0C4DH59 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV5-4A0A0C4DH59 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV5-4A0A0C4DH59 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.1■□□□□ 0.33
TRBV5-4A0A0C4DH59 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC17.1■□□□□ 0.33
TRBV5-4A0A0C4DH59 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV5-4A0A0C4DH59 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV5-4A0A0C4DH59 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV5-4A0A0C4DH59 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV5-4A0A0C4DH59 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV5-4A0A0C4DH59 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
TRBV5-4A0A0C4DH59 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV5-4A0A0C4DH59 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.1■□□□□ 0.33
TRBV5-4A0A0C4DH59 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TRBV5-4A0A0C4DH59 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV5-4A0A0C4DH59 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV5-4A0A0C4DH59 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV5-4A0A0C4DH59 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.1■□□□□ 0.33
TRBV5-4A0A0C4DH59 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV5-4A0A0C4DH59 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC17.1■□□□□ 0.33
TRBV5-4A0A0C4DH59 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC17.1■□□□□ 0.33
TRBV5-4A0A0C4DH59 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.1■□□□□ 0.33
TRBV5-4A0A0C4DH59 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC17.1■□□□□ 0.33
TRBV5-4A0A0C4DH59 AC018712.1-201ENST00000455767 687 ntBASIC17.1■□□□□ 0.33
TRBV5-4A0A0C4DH59 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.1■□□□□ 0.33
TRBV5-4A0A0C4DH59 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.1■□□□□ 0.33
TRBV5-4A0A0C4DH59 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.1■□□□□ 0.33
TRBV5-4A0A0C4DH59 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.1■□□□□ 0.33
TRBV5-4A0A0C4DH59 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.1■□□□□ 0.33
TRBV5-4A0A0C4DH59 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.1■□□□□ 0.33
TRBV5-4A0A0C4DH59 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV5-4A0A0C4DH59 AL139424.1-201ENST00000607572 797 ntBASIC17.1■□□□□ 0.33
TRBV5-4A0A0C4DH59 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV5-4A0A0C4DH59 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
TRBV5-4A0A0C4DH59 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.1■□□□□ 0.33
TRBV5-4A0A0C4DH59 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV5-4A0A0C4DH59 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV5-4A0A0C4DH59 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV5-4A0A0C4DH59 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV5-4A0A0C4DH59 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV5-4A0A0C4DH59 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.1■□□□□ 0.33
TRBV5-4A0A0C4DH59 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV5-4A0A0C4DH59 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV5-4A0A0C4DH59 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.1■□□□□ 0.33
TRBV5-4A0A0C4DH59 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms