Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CLIC4Q9Y696 AGGF1P2-201ENST00000426656 2106 ntBASIC19.93■□□□□ 0.78
CLIC4Q9Y696 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
CLIC4Q9Y696 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC19.93■□□□□ 0.78
CLIC4Q9Y696 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC19.93■□□□□ 0.78
CLIC4Q9Y696 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CLIC4Q9Y696 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC19.92■□□□□ 0.78
CLIC4Q9Y696 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC19.92■□□□□ 0.78
CLIC4Q9Y696 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLIC4Q9Y696 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.92■□□□□ 0.78
CLIC4Q9Y696 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
CLIC4Q9Y696 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CLIC4Q9Y696 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLIC4Q9Y696 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC19.92■□□□□ 0.78
CLIC4Q9Y696 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLIC4Q9Y696 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CLIC4Q9Y696 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLIC4Q9Y696 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
CLIC4Q9Y696 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.92■□□□□ 0.78
CLIC4Q9Y696 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLIC4Q9Y696 PCED1CP-201ENST00000419887 785 ntBASIC19.92■□□□□ 0.78
CLIC4Q9Y696 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.92■□□□□ 0.78
CLIC4Q9Y696 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC19.92■□□□□ 0.78
CLIC4Q9Y696 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC19.92■□□□□ 0.78
CLIC4Q9Y696 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.92■□□□□ 0.78
CLIC4Q9Y696 STK25P1-201ENST00000585406 838 ntBASIC19.92■□□□□ 0.78
CLIC4Q9Y696 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC19.92■□□□□ 0.78
CLIC4Q9Y696 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC19.92■□□□□ 0.78
CLIC4Q9Y696 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLIC4Q9Y696 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLIC4Q9Y696 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CLIC4Q9Y696 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLIC4Q9Y696 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLIC4Q9Y696 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLIC4Q9Y696 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC19.92■□□□□ 0.78
CLIC4Q9Y696 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
CLIC4Q9Y696 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CLIC4Q9Y696 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.92■□□□□ 0.78
CLIC4Q9Y696 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLIC4Q9Y696 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLIC4Q9Y696 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CLIC4Q9Y696 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC19.91■□□□□ 0.78
CLIC4Q9Y696 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CLIC4Q9Y696 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CLIC4Q9Y696 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLIC4Q9Y696 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLIC4Q9Y696 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLIC4Q9Y696 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC19.91■□□□□ 0.78
CLIC4Q9Y696 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CLIC4Q9Y696 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLIC4Q9Y696 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLIC4Q9Y696 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLIC4Q9Y696 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CLIC4Q9Y696 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLIC4Q9Y696 AC103564.2-201ENST00000432853 1299 ntBASIC19.91■□□□□ 0.78
CLIC4Q9Y696 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CLIC4Q9Y696 TSSC2-201ENST00000450217 709 ntBASIC19.91■□□□□ 0.78
CLIC4Q9Y696 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC19.91■□□□□ 0.78
CLIC4Q9Y696 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CLIC4Q9Y696 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.91■□□□□ 0.78
CLIC4Q9Y696 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLIC4Q9Y696 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLIC4Q9Y696 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC19.91■□□□□ 0.78
CLIC4Q9Y696 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLIC4Q9Y696 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
CLIC4Q9Y696 AC005915.1-201ENST00000624912 2018 ntBASIC19.91■□□□□ 0.78
CLIC4Q9Y696 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLIC4Q9Y696 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC19.91■□□□□ 0.78
CLIC4Q9Y696 AC233702.3-201ENST00000578656 1387 ntBASIC19.91■□□□□ 0.78
CLIC4Q9Y696 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC19.91■□□□□ 0.78
CLIC4Q9Y696 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLIC4Q9Y696 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CLIC4Q9Y696 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.91■□□□□ 0.78
CLIC4Q9Y696 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC19.91■□□□□ 0.78
CLIC4Q9Y696 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLIC4Q9Y696 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLIC4Q9Y696 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLIC4Q9Y696 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC19.91■□□□□ 0.78
CLIC4Q9Y696 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CLIC4Q9Y696 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CLIC4Q9Y696 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CLIC4Q9Y696 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CLIC4Q9Y696 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLIC4Q9Y696 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLIC4Q9Y696 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLIC4Q9Y696 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLIC4Q9Y696 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLIC4Q9Y696 PPIH-202ENST00000372549 327 ntTSL 3 BASIC19.9■□□□□ 0.78
CLIC4Q9Y696 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLIC4Q9Y696 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CLIC4Q9Y696 ABR-204ENST00000543210 1049 ntTSL 2 BASIC19.9■□□□□ 0.78
CLIC4Q9Y696 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.9■□□□□ 0.78
CLIC4Q9Y696 KRT18P1-202ENST00000452408 1331 ntBASIC19.9■□□□□ 0.78
CLIC4Q9Y696 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLIC4Q9Y696 AL353593.2-201ENST00000602529 1483 ntBASIC19.9■□□□□ 0.78
CLIC4Q9Y696 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CLIC4Q9Y696 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLIC4Q9Y696 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLIC4Q9Y696 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLIC4Q9Y696 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms