Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
LRCH1Q9Y2L9 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.63■□□□□ 0.25
LRCH1Q9Y2L9 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRCH1Q9Y2L9 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRCH1Q9Y2L9 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRCH1Q9Y2L9 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC16.63■□□□□ 0.25
LRCH1Q9Y2L9 UBE2SP1-201ENST00000450587 669 ntBASIC16.63■□□□□ 0.25
LRCH1Q9Y2L9 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRCH1Q9Y2L9 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC16.63■□□□□ 0.25
LRCH1Q9Y2L9 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRCH1Q9Y2L9 AL359736.2-201ENST00000621992 437 ntBASIC16.63■□□□□ 0.25
LRCH1Q9Y2L9 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
LRCH1Q9Y2L9 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.63■□□□□ 0.25
LRCH1Q9Y2L9 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRCH1Q9Y2L9 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRCH1Q9Y2L9 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.63■□□□□ 0.25
LRCH1Q9Y2L9 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LRCH1Q9Y2L9 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
LRCH1Q9Y2L9 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.63■□□□□ 0.25
LRCH1Q9Y2L9 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LRCH1Q9Y2L9 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
LRCH1Q9Y2L9 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
LRCH1Q9Y2L9 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRCH1Q9Y2L9 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRCH1Q9Y2L9 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.63■□□□□ 0.25
LRCH1Q9Y2L9 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRCH1Q9Y2L9 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRCH1Q9Y2L9 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
LRCH1Q9Y2L9 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
LRCH1Q9Y2L9 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
LRCH1Q9Y2L9 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRCH1Q9Y2L9 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC16.62■□□□□ 0.25
LRCH1Q9Y2L9 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRCH1Q9Y2L9 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRCH1Q9Y2L9 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
LRCH1Q9Y2L9 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
LRCH1Q9Y2L9 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.62■□□□□ 0.25
LRCH1Q9Y2L9 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
LRCH1Q9Y2L9 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.62■□□□□ 0.25
LRCH1Q9Y2L9 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRCH1Q9Y2L9 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRCH1Q9Y2L9 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
LRCH1Q9Y2L9 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRCH1Q9Y2L9 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LRCH1Q9Y2L9 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRCH1Q9Y2L9 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC16.62■□□□□ 0.25
LRCH1Q9Y2L9 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LRCH1Q9Y2L9 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC16.62■□□□□ 0.25
LRCH1Q9Y2L9 RPPH1-201ENST00000516869 333 ntBASIC16.62■□□□□ 0.25
LRCH1Q9Y2L9 DUTP2-201ENST00000519164 463 ntBASIC16.62■□□□□ 0.25
LRCH1Q9Y2L9 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC16.62■□□□□ 0.25
LRCH1Q9Y2L9 RHOD-202ENST00000532559 538 ntTSL 3 BASIC16.62■□□□□ 0.25
LRCH1Q9Y2L9 PRKY-204ENST00000533551 1019 ntBASIC16.62■□□□□ 0.25
LRCH1Q9Y2L9 AC233263.1-201ENST00000578059 224 ntBASIC16.62■□□□□ 0.25
LRCH1Q9Y2L9 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRCH1Q9Y2L9 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRCH1Q9Y2L9 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
LRCH1Q9Y2L9 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.62■□□□□ 0.25
LRCH1Q9Y2L9 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRCH1Q9Y2L9 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRCH1Q9Y2L9 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRCH1Q9Y2L9 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
LRCH1Q9Y2L9 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LRCH1Q9Y2L9 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRCH1Q9Y2L9 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRCH1Q9Y2L9 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRCH1Q9Y2L9 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LRCH1Q9Y2L9 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
LRCH1Q9Y2L9 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.62■□□□□ 0.25
LRCH1Q9Y2L9 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRCH1Q9Y2L9 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC16.62■□□□□ 0.25
LRCH1Q9Y2L9 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRCH1Q9Y2L9 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LRCH1Q9Y2L9 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRCH1Q9Y2L9 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRCH1Q9Y2L9 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LRCH1Q9Y2L9 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRCH1Q9Y2L9 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRCH1Q9Y2L9 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
LRCH1Q9Y2L9 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRCH1Q9Y2L9 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC16.61■□□□□ 0.25
LRCH1Q9Y2L9 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LRCH1Q9Y2L9 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
LRCH1Q9Y2L9 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
LRCH1Q9Y2L9 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.61■□□□□ 0.25
LRCH1Q9Y2L9 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LRCH1Q9Y2L9 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LRCH1Q9Y2L9 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LRCH1Q9Y2L9 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC16.61■□□□□ 0.25
LRCH1Q9Y2L9 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRCH1Q9Y2L9 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC16.61■□□□□ 0.25
LRCH1Q9Y2L9 DET1-205ENST00000558413 583 ntTSL 4 BASIC16.61■□□□□ 0.25
LRCH1Q9Y2L9 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
LRCH1Q9Y2L9 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC16.61■□□□□ 0.25
LRCH1Q9Y2L9 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC16.61■□□□□ 0.25
LRCH1Q9Y2L9 MTDHP1-201ENST00000605323 784 ntBASIC16.61■□□□□ 0.25
LRCH1Q9Y2L9 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LRCH1Q9Y2L9 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC16.61■□□□□ 0.25
LRCH1Q9Y2L9 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LRCH1Q9Y2L9 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms