Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGB4Q9UN71 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGB4Q9UN71 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCDHGB4Q9UN71 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
PCDHGB4Q9UN71 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGB4Q9UN71 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCDHGB4Q9UN71 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCDHGB4Q9UN71 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
PCDHGB4Q9UN71 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGB4Q9UN71 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.99■□□□□ 0.31
PCDHGB4Q9UN71 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGB4Q9UN71 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.99■□□□□ 0.31
PCDHGB4Q9UN71 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGB4Q9UN71 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGB4Q9UN71 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
PCDHGB4Q9UN71 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGB4Q9UN71 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.99■□□□□ 0.31
PCDHGB4Q9UN71 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.99■□□□□ 0.31
PCDHGB4Q9UN71 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.99■□□□□ 0.31
PCDHGB4Q9UN71 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGB4Q9UN71 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.99■□□□□ 0.31
PCDHGB4Q9UN71 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
PCDHGB4Q9UN71 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGB4Q9UN71 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGB4Q9UN71 AL596275.1-201ENST00000423464 877 ntBASIC16.99■□□□□ 0.31
PCDHGB4Q9UN71 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.99■□□□□ 0.31
PCDHGB4Q9UN71 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGB4Q9UN71 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
PCDHGB4Q9UN71 AC140113.3-201ENST00000605663 199 ntBASIC16.99■□□□□ 0.31
PCDHGB4Q9UN71 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGB4Q9UN71 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.99■□□□□ 0.31
PCDHGB4Q9UN71 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGB4Q9UN71 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
PCDHGB4Q9UN71 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGB4Q9UN71 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGB4Q9UN71 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.99■□□□□ 0.31
PCDHGB4Q9UN71 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGB4Q9UN71 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGB4Q9UN71 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGB4Q9UN71 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.99■□□□□ 0.31
PCDHGB4Q9UN71 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGB4Q9UN71 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
PCDHGB4Q9UN71 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGB4Q9UN71 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGB4Q9UN71 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGB4Q9UN71 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.98■□□□□ 0.31
PCDHGB4Q9UN71 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGB4Q9UN71 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.98■□□□□ 0.31
PCDHGB4Q9UN71 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGB4Q9UN71 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGB4Q9UN71 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGB4Q9UN71 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGB4Q9UN71 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGB4Q9UN71 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGB4Q9UN71 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGB4Q9UN71 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGB4Q9UN71 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGB4Q9UN71 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGB4Q9UN71 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGB4Q9UN71 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.98■□□□□ 0.31
PCDHGB4Q9UN71 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGB4Q9UN71 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.98■□□□□ 0.31
PCDHGB4Q9UN71 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.98■□□□□ 0.31
PCDHGB4Q9UN71 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.98■□□□□ 0.31
PCDHGB4Q9UN71 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.98■□□□□ 0.31
PCDHGB4Q9UN71 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.98■□□□□ 0.31
PCDHGB4Q9UN71 AC141257.4-201ENST00000634557 245 ntBASIC16.98■□□□□ 0.31
PCDHGB4Q9UN71 AC136944.6-201ENST00000634818 245 ntBASIC16.98■□□□□ 0.31
PCDHGB4Q9UN71 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGB4Q9UN71 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.98■□□□□ 0.31
PCDHGB4Q9UN71 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGB4Q9UN71 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGB4Q9UN71 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGB4Q9UN71 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGB4Q9UN71 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGB4Q9UN71 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGB4Q9UN71 AL355312.1-201ENST00000407115 2176 ntBASIC16.98■□□□□ 0.31
PCDHGB4Q9UN71 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
PCDHGB4Q9UN71 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGB4Q9UN71 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
PCDHGB4Q9UN71 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGB4Q9UN71 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGB4Q9UN71 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC16.98■□□□□ 0.31
PCDHGB4Q9UN71 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGB4Q9UN71 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
PCDHGB4Q9UN71 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.97■□□□□ 0.31
PCDHGB4Q9UN71 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
PCDHGB4Q9UN71 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
PCDHGB4Q9UN71 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.97■□□□□ 0.31
PCDHGB4Q9UN71 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
PCDHGB4Q9UN71 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGB4Q9UN71 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
PCDHGB4Q9UN71 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGB4Q9UN71 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGB4Q9UN71 LIN28AP1-201ENST00000429574 405 ntBASIC16.97■□□□□ 0.31
PCDHGB4Q9UN71 AC113404.2-201ENST00000507884 177 ntBASIC16.97■□□□□ 0.31
PCDHGB4Q9UN71 RPS20-210ENST00000523936 899 ntTSL 2 BASIC16.97■□□□□ 0.31
PCDHGB4Q9UN71 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
PCDHGB4Q9UN71 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
PCDHGB4Q9UN71 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms