Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SYNPO2Q9UMS6 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SYNPO2Q9UMS6 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SYNPO2Q9UMS6 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SYNPO2Q9UMS6 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC19.97■□□□□ 0.79
SYNPO2Q9UMS6 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC19.97■□□□□ 0.79
SYNPO2Q9UMS6 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC19.97■□□□□ 0.79
SYNPO2Q9UMS6 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SYNPO2Q9UMS6 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SYNPO2Q9UMS6 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SYNPO2Q9UMS6 BCAR1-209ENST00000546196 1340 ntBASIC19.97■□□□□ 0.79
SYNPO2Q9UMS6 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
SYNPO2Q9UMS6 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SYNPO2Q9UMS6 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SYNPO2Q9UMS6 HNRNPRP1-201ENST00000453465 1695 ntBASIC19.97■□□□□ 0.79
SYNPO2Q9UMS6 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SYNPO2Q9UMS6 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
SYNPO2Q9UMS6 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC19.96■□□□□ 0.79
SYNPO2Q9UMS6 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
SYNPO2Q9UMS6 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
SYNPO2Q9UMS6 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SYNPO2Q9UMS6 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SYNPO2Q9UMS6 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SYNPO2Q9UMS6 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
SYNPO2Q9UMS6 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SYNPO2Q9UMS6 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SYNPO2Q9UMS6 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
SYNPO2Q9UMS6 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
SYNPO2Q9UMS6 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SYNPO2Q9UMS6 ACTG1P14-201ENST00000446382 1122 ntBASIC19.96■□□□□ 0.79
SYNPO2Q9UMS6 AC074386.1-202ENST00000463561 864 ntBASIC19.96■□□□□ 0.79
SYNPO2Q9UMS6 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC19.96■□□□□ 0.79
SYNPO2Q9UMS6 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SYNPO2Q9UMS6 AL691403.2-201ENST00000618460 490 ntBASIC19.96■□□□□ 0.79
SYNPO2Q9UMS6 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC19.96■□□□□ 0.79
SYNPO2Q9UMS6 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SYNPO2Q9UMS6 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC19.96■□□□□ 0.79
SYNPO2Q9UMS6 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SYNPO2Q9UMS6 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
SYNPO2Q9UMS6 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SYNPO2Q9UMS6 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC19.96■□□□□ 0.79
SYNPO2Q9UMS6 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SYNPO2Q9UMS6 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
SYNPO2Q9UMS6 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC19.96■□□□□ 0.79
SYNPO2Q9UMS6 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC19.96■□□□□ 0.79
SYNPO2Q9UMS6 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC19.96■□□□□ 0.79
SYNPO2Q9UMS6 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SYNPO2Q9UMS6 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SYNPO2Q9UMS6 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SYNPO2Q9UMS6 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
SYNPO2Q9UMS6 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC19.95■□□□□ 0.78
SYNPO2Q9UMS6 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SYNPO2Q9UMS6 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
SYNPO2Q9UMS6 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
SYNPO2Q9UMS6 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
SYNPO2Q9UMS6 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SYNPO2Q9UMS6 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SYNPO2Q9UMS6 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
SYNPO2Q9UMS6 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SYNPO2Q9UMS6 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SYNPO2Q9UMS6 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.95■□□□□ 0.78
SYNPO2Q9UMS6 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC19.95■□□□□ 0.78
SYNPO2Q9UMS6 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
SYNPO2Q9UMS6 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
SYNPO2Q9UMS6 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC19.95■□□□□ 0.78
SYNPO2Q9UMS6 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
SYNPO2Q9UMS6 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
SYNPO2Q9UMS6 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC19.95■□□□□ 0.78
SYNPO2Q9UMS6 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC19.95■□□□□ 0.78
SYNPO2Q9UMS6 AC107918.2-201ENST00000530817 355 ntBASIC19.95■□□□□ 0.78
SYNPO2Q9UMS6 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC19.95■□□□□ 0.78
SYNPO2Q9UMS6 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC19.95■□□□□ 0.78
SYNPO2Q9UMS6 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SYNPO2Q9UMS6 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC19.95■□□□□ 0.78
SYNPO2Q9UMS6 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
SYNPO2Q9UMS6 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SYNPO2Q9UMS6 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SYNPO2Q9UMS6 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC19.95■□□□□ 0.78
SYNPO2Q9UMS6 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SYNPO2Q9UMS6 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.94■□□□□ 0.78
SYNPO2Q9UMS6 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SYNPO2Q9UMS6 GNAS-203ENST00000306120 1878 ntBASIC19.94■□□□□ 0.78
SYNPO2Q9UMS6 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC19.94■□□□□ 0.78
SYNPO2Q9UMS6 AC025580.3-201ENST00000617932 1424 ntBASIC19.94■□□□□ 0.78
SYNPO2Q9UMS6 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SYNPO2Q9UMS6 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
SYNPO2Q9UMS6 CYP51A1P2-201ENST00000419457 1499 ntBASIC19.94■□□□□ 0.78
SYNPO2Q9UMS6 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SYNPO2Q9UMS6 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SYNPO2Q9UMS6 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC19.94■□□□□ 0.78
SYNPO2Q9UMS6 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SYNPO2Q9UMS6 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC19.94■□□□□ 0.78
SYNPO2Q9UMS6 HTR5BP-201ENST00000430851 1154 ntBASIC19.94■□□□□ 0.78
SYNPO2Q9UMS6 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC19.94■□□□□ 0.78
SYNPO2Q9UMS6 AC092183.1-201ENST00000469884 875 ntBASIC19.94■□□□□ 0.78
SYNPO2Q9UMS6 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC19.94■□□□□ 0.78
SYNPO2Q9UMS6 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC19.94■□□□□ 0.78
SYNPO2Q9UMS6 CYB561-216ENST00000582297 897 ntTSL 3 BASIC19.94■□□□□ 0.78
SYNPO2Q9UMS6 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC19.94■□□□□ 0.78
SYNPO2Q9UMS6 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms