Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.69■□□□□ 0.42
NCKIPSDQ9NZQ3 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
NCKIPSDQ9NZQ3 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NCKIPSDQ9NZQ3 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
NCKIPSDQ9NZQ3 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NCKIPSDQ9NZQ3 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NCKIPSDQ9NZQ3 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
NCKIPSDQ9NZQ3 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
NCKIPSDQ9NZQ3 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
NCKIPSDQ9NZQ3 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NCKIPSDQ9NZQ3 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NCKIPSDQ9NZQ3 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NCKIPSDQ9NZQ3 AKR1C7P-201ENST00000305623 895 ntBASIC17.69■□□□□ 0.42
NCKIPSDQ9NZQ3 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NCKIPSDQ9NZQ3 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NCKIPSDQ9NZQ3 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.69■□□□□ 0.42
NCKIPSDQ9NZQ3 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NCKIPSDQ9NZQ3 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.69■□□□□ 0.42
NCKIPSDQ9NZQ3 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NCKIPSDQ9NZQ3 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.69■□□□□ 0.42
NCKIPSDQ9NZQ3 MIR5100-201ENST00000579544 119 ntBASIC17.69■□□□□ 0.42
NCKIPSDQ9NZQ3 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.69■□□□□ 0.42
NCKIPSDQ9NZQ3 BX640515.1-201ENST00000617215 977 ntBASIC17.69■□□□□ 0.42
NCKIPSDQ9NZQ3 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NCKIPSDQ9NZQ3 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
NCKIPSDQ9NZQ3 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
NCKIPSDQ9NZQ3 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
NCKIPSDQ9NZQ3 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NCKIPSDQ9NZQ3 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NCKIPSDQ9NZQ3 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NCKIPSDQ9NZQ3 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NCKIPSDQ9NZQ3 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NCKIPSDQ9NZQ3 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
NCKIPSDQ9NZQ3 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
NCKIPSDQ9NZQ3 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.69■□□□□ 0.42
NCKIPSDQ9NZQ3 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NCKIPSDQ9NZQ3 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.69■□□□□ 0.42
NCKIPSDQ9NZQ3 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NCKIPSDQ9NZQ3 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.69■□□□□ 0.42
NCKIPSDQ9NZQ3 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NCKIPSDQ9NZQ3 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.68■□□□□ 0.42
NCKIPSDQ9NZQ3 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
NCKIPSDQ9NZQ3 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
NCKIPSDQ9NZQ3 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NCKIPSDQ9NZQ3 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NCKIPSDQ9NZQ3 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
NCKIPSDQ9NZQ3 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NCKIPSDQ9NZQ3 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NCKIPSDQ9NZQ3 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
NCKIPSDQ9NZQ3 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NCKIPSDQ9NZQ3 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
NCKIPSDQ9NZQ3 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
NCKIPSDQ9NZQ3 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
NCKIPSDQ9NZQ3 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NCKIPSDQ9NZQ3 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NCKIPSDQ9NZQ3 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.68■□□□□ 0.42
NCKIPSDQ9NZQ3 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.68■□□□□ 0.42
NCKIPSDQ9NZQ3 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NCKIPSDQ9NZQ3 AP000347.1-202ENST00000435868 847 ntBASIC17.68■□□□□ 0.42
NCKIPSDQ9NZQ3 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.68■□□□□ 0.42
NCKIPSDQ9NZQ3 AF186996.4-201ENST00000467186 377 ntBASIC17.68■□□□□ 0.42
NCKIPSDQ9NZQ3 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.68■□□□□ 0.42
NCKIPSDQ9NZQ3 AC096582.2-201ENST00000510860 516 ntBASIC17.68■□□□□ 0.42
NCKIPSDQ9NZQ3 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.68■□□□□ 0.42
NCKIPSDQ9NZQ3 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
NCKIPSDQ9NZQ3 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.68■□□□□ 0.42
NCKIPSDQ9NZQ3 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NCKIPSDQ9NZQ3 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NCKIPSDQ9NZQ3 AL773604.1-201ENST00000617417 272 ntBASIC17.68■□□□□ 0.42
NCKIPSDQ9NZQ3 TNRC18P3-201ENST00000441896 2691 ntBASIC17.68■□□□□ 0.42
NCKIPSDQ9NZQ3 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
NCKIPSDQ9NZQ3 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.68■□□□□ 0.42
NCKIPSDQ9NZQ3 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NCKIPSDQ9NZQ3 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.68■□□□□ 0.42
NCKIPSDQ9NZQ3 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
NCKIPSDQ9NZQ3 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NCKIPSDQ9NZQ3 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.68■□□□□ 0.42
NCKIPSDQ9NZQ3 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
NCKIPSDQ9NZQ3 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NCKIPSDQ9NZQ3 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NCKIPSDQ9NZQ3 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NCKIPSDQ9NZQ3 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NCKIPSDQ9NZQ3 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
NCKIPSDQ9NZQ3 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
NCKIPSDQ9NZQ3 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
NCKIPSDQ9NZQ3 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NCKIPSDQ9NZQ3 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NCKIPSDQ9NZQ3 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
NCKIPSDQ9NZQ3 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NCKIPSDQ9NZQ3 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.67■□□□□ 0.42
NCKIPSDQ9NZQ3 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NCKIPSDQ9NZQ3 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
NCKIPSDQ9NZQ3 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NCKIPSDQ9NZQ3 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NCKIPSDQ9NZQ3 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NCKIPSDQ9NZQ3 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
NCKIPSDQ9NZQ3 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NCKIPSDQ9NZQ3 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
NCKIPSDQ9NZQ3 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NCKIPSDQ9NZQ3 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms